OpenMS: TransitionHelper.h Source File

| OpenMS 2.5.0

TransitionHelper.h
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2 // OpenMS -- Open-Source Mass Spectrometry
3 // --------------------------------------------------------------------------
4 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
5 // ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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30 // --------------------------------------------------------------------------
31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Witold Wolski $
33 // --------------------------------------------------------------------------
34
35 #pragma once
36
37 #include <OpenMS/OPENSWATHALGO/OpenSwathAlgoConfig.h>
38 #include <map>
39 #include <vector>
40 #include <string>
41
42 namespace OpenSwath
43 {
44
45 struct LightCompound;
46 struct LightTargetedExperiment;
47 struct LightTransition;
48
49 struct OPENSWATHALGO_DLLAPI TransitionHelper
50 {
51
52 static void convert(LightTargetedExperiment& lte,
53 std::map<std::string,
54 std::vector<LightTransition> >& transmap);
55
56
57 // TODO : remove and explain German comments
58 // spiegel
59 static bool findPeptide(const LightTargetedExperiment& lte,
60 const std::string& peptideRef,
61 LightCompound& pep);
62 };
63
64 } //end namespace
65
OpenSwath::TransitionHelper
Definition: TransitionHelper.h:49
OpenSwath::LightCompound
Definition: TransitionExperiment.h:149
OpenSwath
Definition: MRMScoring.h:49
OpenMS::detail::convert
T convert(const String &s)
Definition: ListUtils.h:244
OpenSwath::LightTargetedExperiment
Definition: TransitionExperiment.h:207