| OpenMS 2.5.0

Classes | Namespaces
Contaminants.h File Reference
`#include <OpenMS/KERNEL/FeatureMap.h>`
`#include <OpenMS/FORMAT/FASTAFile.h>`
`#include <OpenMS/METADATA/PeptideIdentification.h>`
`#include <unordered_set>`
`#include <OpenMS/QC/QCBase.h>`

Go to the source code of this file.

## Classes

class | Contaminants
| This class is a metric for the QualityControl TOPP tool. More...
struct | Contaminants::ContaminantsSummary
| structure for storing results More...

## Namespaces

| OpenMS
| Main OpenMS namespace.

## Class Documentation

## ◆ OpenMS::Contaminants::ContaminantsSummary

struct OpenMS::Contaminants::ContaminantsSummary

structure for storing results

Class Members
double | all_contaminants_ratio | (#all contaminants/ #peptides in all)
double | assigned_contaminants_intensity_ratio | (intensity of contaminants in assigned/ intensity of peptides in assigned)
double | assigned_contaminants_ratio | (#contaminants in assigned/ #peptides in assigned)
pair< Int64, Int64 > | empty_features | (features without peptideidentification or with peptideidentifications but without hits; all features)
double | unassigned_contaminants_ratio | (#contaminants in unassigned/ #peptides in unassigned)