| OpenMS 2.5.0

### - f -

- f : Base64::Reinterpreter32_ , Base64::Reinterpreter64_ , IsotopeWavelet::fi_
- f_ : FASTAContainer< TFI_File >
- f_cf_ids_ : MzQuantMLHandler
- f_f_obj_ : MzQuantMLHandler
- f_max_ : PrecursorIonSelectionPreprocessing
- f_observed_Mass : LCElutionPeak
- factor_ : ParentPeakMower , SpectrumCheapDPCorr
- false_discovery_rate : MzTabMetaData
- fapex_intensity : LCElutionPeak
- far_ : Spectrum3DOpenGLCanvas
- fasta_entry : ProteinResolver::ProteinEntry
- fatal_streams_ : LogConfigHandler
- fCentroidPeaks : CentroidData
- fCharge : LCElutionPeak
- fDeconvPeaks : Deisotoper
- feat_finder_ : FeatureFinderIdentificationAlgorithm
- feat_score_ : FeatureHypothesis
- feature : AbsoluteQuantitationStandards::featureConcentration , PSLPFormulation::IndexTriple
- feature0_charge_ : ChargePair
- feature0_index_ : ChargePair
- feature1_charge_ : ChargePair
- feature1_index_ : ChargePair
- feature_ : FeatureEditDialog , FeatureOpenMS , GridFeature
- feature_compare_ : FeatureFinderIdentificationAlgorithm
- feature_distance_ : FeatureGroupingAlgorithmKD , QTClusterFinder
- feature_filter_peptides_ : FeatureFinderIdentificationAlgorithm
- feature_filter_quality_ : FeatureFinderIdentificationAlgorithm
- feature_id : CsiFingerIdMzTabWriter::CsiAdapterIdentification
- feature_ID : SHFeature
- feature_id : SiriusMzTabWriter::SiriusAdapterIdentification
- feature_index_ : GridFeature
- feature_list : LCMS
- feature_map_ : FeatureFinderMultiplexAlgorithm , MRMFeature
- feature_maps_ : MSQuantifications::Assay , MSQuantifications , MSSim
- feature_match_status : SHFeature
- feature_max : SvmTheoreticalSpectrumGenerator::SvmModelParameterSet
- feature_min : SvmTheoreticalSpectrumGenerator::SvmModelParameterSet
- feature_mz : SIPPeptide
- feature_name_ : AbsoluteQuantitationMethod
- feature_only_ : SiriusAdapterAlgorithm
- feature_rt : SIPPeptide
- feature_type : SIPPeptide
- featureExtraInformation : SHFeature
- features : LayerData , MSstatsFile::AggregatedConsensusInfo
- features_ : FeatureFinderAlgorithm , KDTreeFeatureMaps , MRMFeature , MRMFeatureFilter , MRMFeatureOpenMS
- fEndTR : LCElutionPeak
- ff_ : FeatureFinderAlgorithm
- fid : SiriusMSFile::CompoundInfo
- field : DataFilters::DataFilter
- file_ : Bzip2Ifstream , BaseException , HDF5Connector , XMLHandler
- file_current_index_ : Bzip2InputStream , GzipInputStream
- file_name_ : ListEditorDelegate , TOPPASResource , TOPPASScene
- file_origin_to_idx_ : IDMergerAlgorithm
- file_path_ : DocumentIdentifier , DocumentIdentifierVisualizer
- file_size_ : SourceFile , SourceFileVisualizer
- file_stream_ : CSVWriter
- file_type_ : DocumentIdentifier , DocumentIdentifierVisualizer , SourceFile , SourceFileVisualizer
- filename : ConsensusMap::ColumnHeader , LayerData
- filename_ : CachedmzML , FIAMSScheduler , INIFileEditorWindow , IndexedMzMLHandler , MzMLSqliteHandler , MzMLSqliteSwathHandler
- fileName_ : ParamEditorDelegate
- filename_ : MSDataSqlConsumer , OnDiscMSExperiment , ToolsDialog , TOPPASToolConfigDialog , XMLValidator
- filename_cached_ : CachedmzML
- filenames : TOPPASVertex::VertexRoundPackage
- filenames_ : File::TemporaryFiles_ , TOPPASVertex::TOPPASFilenames
- files_total_ : TOPPASOutputFileListVertex
- files_written_ : TOPPASOutputFileListVertex
- filestream_ : IndexedMzMLHandler
- fill_data_ : PeakFileOptions
- filled_ : IDMergerAlgorithm
- filter_ : DataFilterDialog
- filter_by_num_masstraces_ : SiriusAdapterAlgorithm
- filter_dock_widget_ : TOPPViewBase
- filter_passed : PeptideIndexing::FoundProteinFunctor
- filter_rejected : PeptideIndexing::FoundProteinFunctor
- filter_threshold_ : PeptideIdentificationVisualizer , ProteinIdentificationVisualizer
- filters : LayerData
- filters_ : DataFilters , TOPPViewBase
- filters_check_box_ : TOPPViewBase
- final_MS_ : MassAnalyzerVisualizer
- final_MS_exponent_ : MassAnalyzer
- finalized_ : QTCluster
- finder_ : AhoCorasickAmbiguous
- finished_ : TOPPASVertex
- first : ProbablePhosphoSites , TransformationModel::DataPoint
- first_ : AreaIterator< ValueT, ReferenceT, PointerT, SpectrumIteratorT, PeakIteratorT > , SignalToNoiseEstimator< Container >
- first_column_ : FuzzyStringComparator
- first_name_ : ContactPerson
- firstname_ : ContactPersonVisualizer
- fIsotopMass : LCElutionPeak
- fit_data_ : MapAlignmentAlgorithmKD
- fit_EMG_ : PeakIntegrator
- fittedIntensity_ : CentroidPeak
- fitter_emg1D_ : EmgScoring
- five_prime_ : NASequence
- five_prime_gain_ : DigestionEnzymeRNA , RNaseDigestion
- fixed_mod : MzIdentMLDOMHandler::ModificationParam , MzTabMetaData
- fixed_modification_ : ModificationDefinition
- fixed_modifications : ProteinIdentification::SearchParameters
- fixed_modifications_ : PepXMLFile , PepXMLFileMascot , PrecursorIonSelectionPreprocessing
- fixed_mods : DBSearchParam
- fixed_mods_ : ModificationDefinitionsSet , PrecursorIonSelectionPreprocessing
- fixedModNames_ : OpenPepXLAlgorithm , OpenPepXLLFAlgorithm
- flag : MapAlignmentAlgorithmSpectrumAlignment::Compare , QcMLFile::QualityParameter
- flag_or_filter_ : MRMFeatureFilter
- flags : LayerData
- flags_ : Annotation1DTextItem , FeatureFinder
- flipped : LayerData
- flipped_y_axis_ : Spectrum1DWidget
- float_data_arrays_ : MSChromatogram , MSSpectrum , ProteinIdentification::ProteinGroup
- floats_32 : MzMLHandlerHelper::BinaryData
- floats_64 : MzMLHandlerHelper::BinaryData
- flush_after_ : MSDataSqlConsumer
- flux_ : HPLC
- fMinPeakGroupSize : Deisotoper
- fMonoMass : LCElutionPeak
- fmz : SiriusMSFile::CompoundInfo
- fNoise : CentroidData
- fNrIsotopes : LCElutionPeak
- followUpScan : IsobaricChannelExtractor::PuritySate_
- force_constraints_ : FeatureDistance
- force_default_mods_ : XTandemInfile
- force_invalid_mods_ : TransitionTSVFile
- force_maxquant_compatibility_ : PeakFileOptions
- force_tpp_compatibility_ : PeakFileOptions
- form_version_ : MascotInfile
- format : MzTabMSRunMetaData
- format_ : SaveImageDialog
- formula : AccurateMassSearchEngine::MappingEntry_ , IdentifiedCompound , SiriusMSFile::CompoundInfo , SiriusMzTabWriter::SiriusAdapterHit
- formula_ : Adduct , EmpiricalFormula , Residue , ResidueModification , Ribonucleotide
- forward_ : HiddenMarkovModel
- found_adduct_ : AccurateMassSearchResult
- found_precursor_charge_ : SpectralMatch
- found_precursor_mass_ : SpectralMatch
- fpeak_area : LCElutionPeak
- fPeakGroupStart : CentroidData
- fraction : ExperimentalDesign::MSFileSectionEntry
- fraction_ : MSstatsFile::MSstatsLine_ , MSstatsFile::MSstatsTMTLine_
- fraction_counter_ : PrecursorIonSelection
- fraction_group : ExperimentalDesign::MSFileSectionEntry
- fraction_identifier_ : ExperimentalSettings , ExperimentalSettingsVisualizer
- frag_annotations : OPXLDataStructs::CrossLinkSpectrumMatch
- frag_charge_ : MSstatsFile::MSstatsLine_
- fragment_annotations : SimpleSearchEngineAlgorithm::AnnotatedHit_
- fragment_annotations_ : PeptideHit
- fragment_charge : TransitionTSVFile::TSVTransition , LightTransition
- fragment_ion_ : MSstatsFile::MSstatsLine_
- fragment_ion_codes_ : NucleicAcidSearchEngine
- fragment_lower_mz_ : XTandemInfile
- fragment_mass_error_unit_ : XTandemInfile
- fragment_mass_tolerance : DBSearchParam , ProteinIdentification::SearchParameters
- fragment_mass_tolerance_ : AScore , CompNovoIdentificationBase , CompNovoIonScoringBase , OpenPepXLAlgorithm , OpenPepXLLFAlgorithm , SimpleSearchEngineAlgorithm , XTandemInfile
- fragment_mass_tolerance_ppm : ProteinIdentification::SearchParameters
- fragment_mass_tolerance_unit_ : SimpleSearchEngineAlgorithm
- fragment_mass_tolerance_unit_ppm_ : OpenPepXLAlgorithm , OpenPepXLLFAlgorithm
- fragment_mass_tolerance_xlinks_ : OpenPepXLAlgorithm , OpenPepXLLFAlgorithm
- fragment_mass_type_ : XTandemInfile
- fragment_modification : TransitionTSVFile::TSVTransition
- fragment_mz_error_ : MetaboliteSpectralMatching
- fragment_mzdelta : TransitionTSVFile::TSVTransition
- fragment_nr : TransitionTSVFile::TSVTransition
- fragment_tolerance : MzIdentMLDOMHandler::SpectrumIdentificationProtocol
- fragment_tolerance_ppm : DBSearchParam
- fragment_tolerance_ppm_ : AScore
- fragment_type : TransitionTSVFile::TSVTransition
- fragment_window_ : SpectraIdentificationViewWidget
- fragmentation_method : MzTabMSRunMetaData
- fragmenterror_statistics_ : SpectrumAnnotator
- fragmentMZ : MS2Fragment
- frame_size_ : SavitzkyGolayFilter
- freq_ : IonDetectorVisualizer
- from_ : TOPPASEdge
- from_max_to_left_ : IsotopeWaveletTransform< PeakType >
- from_max_to_right_ : IsotopeWaveletTransform< PeakType >
- front_boxes_ : IsotopeWaveletTransform< PeakType >
- fRT : LCElutionPeak
- fScanNumber : Deisotoper
- fScanNumberApex : LCElutionPeak
- fScanNumberEnd : LCElutionPeak
- fScanNumberStart : LCElutionPeak
- fScanRetentionTime : CentroidData
- fShortReportFlag : Deisotoper
- fSignalToNoise : LCElutionPeak
- fSNIntensityThreshold : LCElutionPeak
- fStartTR : LCElutionPeak
- fTheta : Deisotoper
- fulfilled_ : SemanticValidator
- full_id_ : ResidueModification
- full_meta_ : MSDataSqlConsumer
- full_name : MzTabCVMetaData
- full_name_ : ResidueModification
- FULL_SQ : MS2Info
- fullname : CV
- FullPeptideName : TransitionTSVFile::TSVTransition
- function_ : BaseException
- fVolume : LCElutionPeak
- fwhm_ : MassTrace
- fwhm_bound_ : PeakPickerCWT
- fwhm_end_idx_ : MassTrace
- fwhm_mz_avg : MassTrace
- fwhm_start_idx_ : MassTrace
- fwhm_threshold_ : TargetedSpectraExtractor
- fwhm_weight_ : TargetedSpectraExtractor
- fWindowWidth : CentroidData