| OpenMS 2.5.0

MzMLSqliteHandler Member List

This is the complete list of members for MzMLSqliteHandler, including all inherited members.

chrom_id_ | MzMLSqliteHandler | protected
createIndices_() | MzMLSqliteHandler | protected
createTables() | MzMLSqliteHandler |
filename_ | MzMLSqliteHandler | protected
getNrChromatograms() const | MzMLSqliteHandler |
getNrSpectra() const | MzMLSqliteHandler |
getSpectraIndicesbyRT(double RT, double deltaRT, const std::vector< int > &indices) const | MzMLSqliteHandler |
linear_abs_mass_acc_ | MzMLSqliteHandler | protected
MzMLSqliteHandler(String filename) | MzMLSqliteHandler |
populateChromatogramsWithData_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms) const | MzMLSqliteHandler | protected
populateChromatogramsWithData_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms, const std::vector< int > &indices) const | MzMLSqliteHandler | protected
populateSpectraWithData_(sqlite3 *db, std::vector< MSSpectrum > &spectra) const | MzMLSqliteHandler | protected
populateSpectraWithData_(sqlite3 *db, std::vector< MSSpectrum > &spectra, const std::vector< int > &indices) const | MzMLSqliteHandler | protected
prepareChroms_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms, const std::vector< int > &indices={}) const | MzMLSqliteHandler | protected
prepareSpectra_(sqlite3 *db, std::vector< MSSpectrum > &spectra, const std::vector< int > &indices={}) const | MzMLSqliteHandler | protected
readChromatograms(std::vector< MSChromatogram > &exp, const std::vector< int > &indices, bool meta_only=false) const | MzMLSqliteHandler |
readExperiment(MSExperiment &exp, bool meta_only=false) const | MzMLSqliteHandler |
readSpectra(std::vector< MSSpectrum > &exp, const std::vector< int > &indices, bool meta_only=false) const | MzMLSqliteHandler |
run_id_ | MzMLSqliteHandler | protected
setConfig(bool write_full_meta, bool use_lossy_compression, double linear_abs_mass_acc, int sql_batch_size=500) | MzMLSqliteHandler | inline
spec_id_ | MzMLSqliteHandler | protected
sql_batch_size_ | MzMLSqliteHandler | protected
use_lossy_compression_ | MzMLSqliteHandler | protected
write_full_meta_ | MzMLSqliteHandler | protected
writeChromatograms(const std::vector< MSChromatogram > &chroms) | MzMLSqliteHandler |
writeExperiment(const MSExperiment &exp) | MzMLSqliteHandler |
writeRunLevelInformation(const MSExperiment &exp, bool write_full_meta, int run_id) | MzMLSqliteHandler |
writeSpectra(const std::vector< MSSpectrum > &spectra) | MzMLSqliteHandler |