| OpenMS 2.5.0

Public Member Functions | Protected Attributes | List of all members
SpectraMerger::SpectraDistance_ Class Reference

`#include <OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h>`

Inheritance diagram for SpectraMerger::SpectraDistance_:

## Public Member Functions

| SpectraDistance_ ()
void | updateMembers_ () override
| This method is used to update extra member variables at the end of the setParameters() method. More...
double | getSimilarity (const double d_rt, const double d_mz) const
double | operator() (const BaseFeature &first, const BaseFeature &second) const
Public Member Functions inherited from DefaultParamHandler
| DefaultParamHandler (const String &name)
| Constructor with name that is displayed in error messages. More...
| DefaultParamHandler (const DefaultParamHandler &rhs)
| Copy constructor. More...
virtual | ~DefaultParamHandler ()
| Destructor. More...
virtual DefaultParamHandler & | operator= (const DefaultParamHandler &rhs)
| Assignment operator. More...
virtual bool | operator== (const DefaultParamHandler &rhs) const
| Equality operator. More...
void | setParameters (const Param &param)
| Sets the parameters. More...
const Param & | getParameters () const
| Non-mutable access to the parameters. More...
const Param & | getDefaults () const
| Non-mutable access to the default parameters. More...
const String & | getName () const
| Non-mutable access to the name. More...
void | setName (const String &name)
| Mutable access to the name. More...
const std::vector< String > & | getSubsections () const
| Non-mutable access to the registered subsections. More...

## Protected Attributes

double | rt_max_
double | mz_max_
Protected Attributes inherited from DefaultParamHandler
Param | param_
| Container for current parameters. More...
Param | defaults_
| Container for default parameters. This member should be filled in the constructor of derived classes! More...
std::vector< String > | subsections_
| Container for registered subsections. This member should be filled in the constructor of derived classes! More...
String | error_name_
| Name that is displayed in error messages during the parameter checking. More...
bool | check_defaults_
| If this member is set to false no checking if parameters in done;. More...
bool | warn_empty_defaults_
| If this member is set to false no warning is emitted when defaults are empty;. More...

## Additional Inherited Members

Protected Member Functions inherited from DefaultParamHandler
void | defaultsToParam_ ()
| Updates the parameters after the defaults have been set in the constructor. More...

## Constructor & Destructor Documentation

## ◆ SpectraDistance_()

SpectraDistance_ | ( |  | ) |

inline

## Member Function Documentation

## ◆ getSimilarity()

double getSimilarity | ( | const double | d_rt,
|  | const double | d_mz
| ) |  | const

inline

## ◆ operator()()

double operator() | ( | const BaseFeature & | first,
|  | const BaseFeature & | second
| ) |  | const

inline

References Peak2D::getMZ(), and Peak2D::getRT().

## ◆ updateMembers_()

void updateMembers_ | ( |  | ) |

inline override virtual

This method is used to update extra member variables at the end of the setParameters() method.

Also call it at the end of the derived classes' copy constructor and assignment operator.

The default implementation is empty.

Reimplemented from DefaultParamHandler.

## Member Data Documentation

## ◆ mz_max_

double mz_max_

protected

## ◆ rt_max_

double rt_max_

protected