| OpenMS 2.5.0

### - t -

- t : RANSACParam
- t_star_ : LinearRegression
- tab_bar_ : TOPPASBase , TOPPViewBase
- tab_width_ : FuzzyStringComparator
- table_steps_ : IsotopeWavelet
- table_widget_ : SpectraIdentificationViewWidget
- tableRows : QcMLFile::Attachment
- tag_ : CVMappingFile , MascotXMLHandler , MzIdentMLHandler , MzQuantMLHandler , PTMXMLHandler , ToolDescriptionHandler , TraMLHandler , UnimodXMLHandler , OMSSAXMLFile , QcMLFile , XTandemXMLFile
- tag_count_ : InspectInfile
- taggingmass_shift_ : TaggingVisualizer
- taggingvariant_ : TaggingVisualizer
- tags : Param::ParamEntry , ParameterInformation
- tags_open_ : MascotXMLHandler
- tailing_factor : PeakIntegrator::PeakShapeMetrics
- target : FileMapping , LogStreamBuf::StreamStruct
- target_ : ListUtils::DoubleTolerancePredicate_
- target_in_param_ : TOPPASEdge
- target_input_param_indices_ : TOPPASIOMappingDialog
- target_intensity : PrecursorPurity::PurityScores
- target_peak_count : PrecursorPurity::PurityScores
- targetMzXML : FTPeakDetectController
- targets_ : TargetedExperiment
- tau_ : EGHFitter1D , EGHModel , EGHTraceFitter
- taxid : MzTabNucleicAcidSectionRow , MzTabProteinSectionRow , MzTabSmallMoleculeSectionRow
- taxon_ : XTandemInfile
- taxonomy : DBSearchParam , ProteinIdentification::SearchParameters
- taxonomy_ : MascotInfile , ProteinIdentificationVisualizer
- taxonomy_file_ : XTandemInfile
- td_ : AcqusHandler , ToolDescriptionHandler
- td_vec_ : ToolDescriptionHandler
- tde_ : ToolDescriptionHandler
- technical_rng_ : SimRandomNumberGenerator
- techrepmixture_ : MSstatsFile::MSstatsTMTLine_
- temp_ : BaseVisualizer< ObjectType >
- temperature_ : Digestion , HPLC
- temporary_annotations_ : TOPPViewIdentificationViewBehavior
- temporary_files_ : File
- term_name_ : CVMappingTerm
- term_spec_ : ResidueModification , Ribonucleotide
- term_spec_alpha : OPXLDataStructs::ProteinProteinCrossLink
- term_spec_beta : OPXLDataStructs::ProteinProteinCrossLink
- term_specs_ : UnimodXMLHandler
- terminal_series_match_ratio_ : SpectrumAnnotator
- terminus : PepXMLFile::AminoAcidModification
- terms_ : ControlledVocabulary
- test_mode_ : TOPPBase
- text_ : Annotation1DItem
- text_box_content_ : Spectrum1DCanvas
- text_fail : ToolExternalDetails
- text_finish : ToolExternalDetails
- text_startup : ToolExternalDetails
- tgt_begin_ : MatchedIterator< CONT_T, TRAIT, CONST_T >
- tgt_end_ : MatchedIterator< CONT_T, TRAIT, CONST_T >
- th_ : BernNorm
- THEO_MZ : MS2Info
- theoretical_int : FeatureFinderAlgorithmPickedHelperStructs::MassTrace
- theoretical_mass : Compound
- theoretical_mz : FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern
- theoretical_mz_ : AccurateMassSearchResult
- theoretical_pattern : FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern
- THREADED_RANDOM_NUMBER_POOL_SIZE_ : RawMSSignalSimulation
- threaded_random_numbers_ : RawMSSignalSimulation
- threaded_random_numbers_index_ : RawMSSignalSimulation
- threads_active_ : TOPPASScene
- threads_outer_loop_ : OpenSwathWorkflowBase
- three_letter_code_ : Residue
- three_prime_ : NASequence
- three_prime_gain_ : DigestionEnzymeRNA , RNaseDigestion
- thresh_p_ : MassExplainer
- threshold_ : ClusterHierarchical , MapAlignmentAlgorithmSpectrumAlignment , ThresholdMower
- threshold_cvs : MzIdentMLDOMHandler::SpectrumIdentificationProtocol
- threshold_ups : MzIdentMLDOMHandler::SpectrumIdentificationProtocol
- TIC : MorpheusScore::Result
- tic_weight_ : TargetedSpectraExtractor
- tick_level_ : AxisWidget
- ticks_ : Annotation1DDistanceItem
- time_limit : LPWrapper::SolverParam
- timeout_ : MascotRemoteQuery
- timepoint_vali_ : GradientVisualizer
- timepoints_ : GradientVisualizer
- timers_ : FileWatcher
- times_ : Gradient
- timestamp : LogStreamBuf::LogCacheStruct
- tissue : MzTabSampleMetaData
- title : Citation , MzTabMetaData
- tmp_boxes_ : IsotopeWaveletTransform< PeakType >
- tmp_dir_ : SiriusAdapterAlgorithm::SiriusTemporaryFileSystemObjects
- tmp_ms_file_ : SiriusAdapterAlgorithm::SiriusTemporaryFileSystemObjects
- tmp_neighbors_ : QTCluster
- tmp_out_dir_ : SiriusAdapterAlgorithm::SiriusTemporaryFileSystemObjects
- tmp_path_ : TOPPASBase , TOPPASScene , TOPPASToolVertex
- to_ : MascotRemoteQuery , TOPPASEdge
- TOF_ : MassAnalyzerVisualizer
- TOF_total_path_length_ : MassAnalyzer
- tol_ : MatchedIterator< CONT_T, TRAIT, CONST_T >
- tolerance : EqualInTolerance< CompareType >
- tolerance_ : ListUtils::DoubleTolerancePredicate_
- tolerance_mz_ : TwoDOptimization
- tolerance_stdev_box_ : Fitter1D
- toleranceMZ_ : SuperHirnParameters
- too_few_peptides : PeptideAndProteinQuant::Statistics
- tool_bar_ : TOPPASBase , TOPPViewBase
- tool_bar_1d_ : TOPPViewBase
- tool_bar_2d_cons_ : TOPPViewBase
- tool_bar_2d_feat_ : TOPPViewBase
- tool_bar_2d_ident_ : TOPPViewBase
- tool_bar_2d_peak_ : TOPPViewBase
- tool_desc_ : ToolsDialog
- tool_description_ : TOPPBase
- tool_name_ : TOPPASToolConfigDialog , TOPPBase
- tool_ready_ : TOPPASToolVertex
- tool_type_ : TOPPASToolConfigDialog
- toolname_ : DocumentIDTagger
- tools_combo_ : ToolsDialog
- tools_external_ : ToolHandler
- tools_external_loaded_ : ToolHandler
- tools_internal_ : ToolHandler
- tools_internal_loaded_ : ToolHandler
- tools_tree_view_ : TOPPASBase
- TOP_MARGIN : Spectrum1DCanvas
- top_matches_to_report_ : TargetedSpectraExtractor
- top_n_hits_ : SiriusAdapterAlgorithm
- topNmatch_fragmenterrors_ : SpectrumAnnotator
- topo_nr_ : TOPPASVertex
- topo_sort_marked_ : TOPPASVertex
- topp_ : TOPPViewBase
- topp_ini_file_ : TOPPBase
- topp_processes_queue_ : TOPPASScene
- total_abundances : PeptideAndProteinQuant::PeptideData , PeptideAndProteinQuant::ProteinData
- total_current : OPXLDataStructs::CrossLinkSpectrumMatch
- total_features : PeptideAndProteinQuant::Statistics
- total_gradient_time_ : RTSimulation
- total_intensity : PrecursorPurity::PurityScores
- total_intensity_ : FeatureFindingMetabo
- total_nr_peaks : TwoDOptimization::Data
- total_peak_area : SHFeature
- total_peptides : PeptideAndProteinQuant::Statistics
- total_size_ : MSExperiment
- total_weight_reciprocal_ : FeatureDistance
- total_width : PeakIntegrator::PeakShapeMetrics
- total_xic : OpenSwath_Scores
- TR : MS1Signal , MS2ConsensusSpectrum , MS2Fragment , MS2Info , MSPeak , SHFeature
- tr_ : CentroidPeak
- TR_APEX : SHFeature
- TR_END : SHFeature
- tr_gr_id_ : MRMTransitionGroup< ChromatogramType, TransitionType >
- TR_START : SHFeature
- tr_table : ToolExternalDetails
- trace_ : Param::ParamIterator
- trace_peaks_ : MassTrace
- trace_termination_criterion_ : MassTraceDetection
- trace_termination_outliers_ : MassTraceDetection
- trace_tolerance_ : FeatureFinderAlgorithmPicked
- traces_ptr : TraceFitter::ModelData
- trafo_external_ : FeatureFinderIdentificationAlgorithm
- train_count_trans_all_ : HiddenMarkovModel
- train_emission_prob_ : HiddenMarkovModel
- trained_trans_ : HiddenMarkovModel
- training_data_ : SVMWrapper
- training_problem_ : SVMWrapper
- training_set_ : SVMWrapper
- training_steps_count_ : HiddenMarkovModel
- trans_ : HiddenMarkovModel
- trans_intens_ : IsotopeWaveletTransform< PeakType >::TransSpectrum
- trans_x_ : Spectrum3DOpenGLCanvas
- trans_y_ : Spectrum3DOpenGLCanvas
- transformation_model_ : AbsoluteQuantitationMethod
- transformation_model_params_ : AbsoluteQuantitationMethod
- transformations_ : MapAlignmentAlgorithmKD
- transition_flags_ : ReactionMonitoringTransition
- transition_map_ : ConfidenceScoring , MRMTransitionGroup< ChromatogramType, TransitionType >
- transition_name : TransitionTSVFile::TSVTransition , LightTransition
- transition_quality_score : MetaboTargetedAssay
- transitions : LightTargetedExperiment , Peptide
- transitions_ : MRMTransitionGroup< ChromatogramType, TransitionType > , TargetedExperiment
- traversed : ProteinResolver::PeptideEntry , ProteinResolver::ProteinEntry
- trCoord_ : BackgroundIntensityBin
- treatmentcomment_ : DigestionVisualizer , ModificationVisualizer , TaggingVisualizer
- treatments_ : Sample
- treatmenttype_ : DigestionVisualizer , ModificationVisualizer , TaggingVisualizer
- tree_ : ParamEditor
- tree_id_ : PeptideIdentificationVisualizer , ProteinIdentificationVisualizer
- tree_timeout_ : SiriusAdapterAlgorithm
- treescore : SiriusMzTabWriter::SiriusAdapterHit
- treeview_ : MetaDataBrowser
- trEnd : MS2Fragment
- trgroup_ : TransitionGroupOpenMS< SpectrumT, TransitionT >
- trie_db_pos_length_ : InspectOutfile
- trie_delimiter_ : InspectOutfile
- trim_right_cutoff_ : ExtendedIsotopeModel , IsotopeModel
- trimmed_left : FeatureFinderAlgorithmPickedHelperStructs::TheoreticalIsotopePattern
- trStart : MS2Fragment
- trTol_ : SuperHirnParameters
- tryptic_only_ : CompNovoIdentificationBase
- tv : TOPPASScene::TOPPProcess
- tv_ : TOPPViewIdentificationViewBehavior , TOPPViewSpectraViewBehavior
- two_d_optimization_ : PeakPickerCWT
- type : LayerData , ParameterInformation , PeakShape , TOPPASToolVertex::IOInfo
- type_ : ChromatogramSettings , ListEditorDelegate , ListTable , IonDetector , IonDetectorVisualizer , ListEditor , MassAnalyzer , MassAnalyzerVisualizer , PrecursorIonSelection , ProgressLogger , SampleTreatment , SpectrumSettings , SpectrumSettingsVisualizer , TOPPASToolVertex
- typeName_ : ListEditorDelegate
- types : ToolDescriptionInternal