| OpenMS 2.5.0

ConsensusMapMergerAlgorithm Member List

This is the complete list of members for ConsensusMapMergerAlgorithm, including all inherited members.

accessionEqual_(const ProteinHit &p1, const ProteinHit &p2) | ConsensusMapMergerAlgorithm | inline private static
accessionHash_(const ProteinHit &p) | ConsensusMapMergerAlgorithm | inline private static
check_defaults_ | DefaultParamHandler | protected
checkOldRunConsistency_(const std::vector< ProteinIdentification > &protRuns, const String &experiment_type) const | ConsensusMapMergerAlgorithm | private
checkOldRunConsistency_(const std::vector< ProteinIdentification > &protRuns, const ProteinIdentification &ref, const String &experiment_type) const | ConsensusMapMergerAlgorithm | private
checkRunSettings_(const ProteinIdentification &idRun, const ProteinIdentification &ref, const String &experiment_type) const | ConsensusMapMergerAlgorithm | private
CMD enum value | ProgressLogger |
ConsensusMapMergerAlgorithm() | ConsensusMapMergerAlgorithm |
current_logger_ | ProgressLogger | mutable protected
DefaultParamHandler(const String &name) | DefaultParamHandler |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |
defaults_ | DefaultParamHandler | protected
defaultsToParam_() | DefaultParamHandler | protected
endProgress() const | ProgressLogger |
equal_type typedef | ConsensusMapMergerAlgorithm | private
error_name_ | DefaultParamHandler | protected
getDefaults() const | DefaultParamHandler |
getLogType() const | ProgressLogger |
getName() const | DefaultParamHandler |
getParameters() const | DefaultParamHandler |
getSubsections() const | DefaultParamHandler |
GUI enum value | ProgressLogger |
hash_type typedef | ConsensusMapMergerAlgorithm | private
last_invoke_ | ProgressLogger | mutable protected
LogType enum name | ProgressLogger |
logTypeToFactoryName_(LogType type) | ProgressLogger | protected static
mergeAllIDRuns(ConsensusMap &cmap) const | ConsensusMapMergerAlgorithm |
mergeProteinIDRuns(ConsensusMap &cmap, const std::map< unsigned, unsigned > &mapIdx_to_new_protIDRun) const | ConsensusMapMergerAlgorithm |
mergeProteinsAcrossFractionsAndReplicates(ConsensusMap &cmap, const ExperimentalDesign &exp_design) const | ConsensusMapMergerAlgorithm |
nextProgress() const | ProgressLogger |
NONE enum value | ProgressLogger |
OpenMS::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other) | ProgressLogger |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual
param_ | DefaultParamHandler | protected
ProgressLogger() | ProgressLogger |
ProgressLogger(const ProgressLogger &other) | ProgressLogger |
recursion_depth_ | ProgressLogger | protected static
setLogType(LogType type) const | ProgressLogger |
setName(const String &name) | DefaultParamHandler |
setParameters(const Param &param) | DefaultParamHandler |
setProgress(SignedSize value) const | ProgressLogger |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger |
subsections_ | DefaultParamHandler | protected
type_ | ProgressLogger | mutable protected
updateMembers_() | DefaultParamHandler | protected virtual
warn_empty_defaults_ | DefaultParamHandler | protected
~DefaultParamHandler() | DefaultParamHandler | virtual
~ProgressLogger() | ProgressLogger |