| OpenMS 2.5.0

PeakPickerCWT Member List

This is the complete list of members for PeakPickerCWT, including all inherited members.

addPeak_(std::vector< PeakShape > &peaks_DC, PeakArea_ &area, double left_width, double right_width, OptimizePeakDeconvolution::Data &data) const | PeakPickerCWT | protected
check_defaults_ | DefaultParamHandler | protected
CMD enum value | ProgressLogger |
ConstPeakIterator typedef | PeakPickerCWT |
correlate_(const PeakShape &peak, const PeakArea_ &area, Int direction=0) const | PeakPickerCWT | protected
current_logger_ | ProgressLogger | mutable protected
deconvolutePeak_(PeakShape &shape, std::vector< PeakShape > &peak_shapes, double peak_bound_cwt) const | PeakPickerCWT | protected
deconvolution_ | PeakPickerCWT | protected
DefaultParamHandler(const String &name) | DefaultParamHandler |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |
defaults_ | DefaultParamHandler | protected
defaultsToParam_() | DefaultParamHandler | protected
determineChargeState_(std::vector< double > &peak_values) const | PeakPickerCWT | protected
endProgress() const | ProgressLogger |
error_name_ | DefaultParamHandler | protected
estimatePeakWidth(const PeakMap &input) | PeakPickerCWT |
fitPeakShape_(const PeakArea_ &area) const | PeakPickerCWT | protected
fwhm_bound_ | PeakPickerCWT | protected
getDefaults() const | DefaultParamHandler |
getLogType() const | ProgressLogger |
getMaxPosition_(const PeakIterator first, const PeakIterator last, const ContinuousWaveletTransform &wt, PeakArea_ &area, const Int distance_from_scan_border, const double peak_bound_cwt, const double peak_bound_ms2_level_cwt, const Int direction=1) const | PeakPickerCWT | protected
getName() const | DefaultParamHandler |
getNumberOfPeaks_(ConstPeakIterator first, ConstPeakIterator last, std::vector< double > &peak_values, Int direction, double resolution, ContinuousWaveletTransformNumIntegration &wt, double peak_bound_cwt) const | PeakPickerCWT | protected
getParameters() const | DefaultParamHandler |
getPeakArea_(const PeakArea_ &area, double &area_left, double &area_right) const | PeakPickerCWT | protected
getPeakCentroid_(PeakArea_ &area) const | PeakPickerCWT | protected
getPeakEndPoints_(PeakIterator first, PeakIterator last, PeakArea_ &area, Int distance_from_scan_border, Int &peak_left_index, Int &peak_right_index, ContinuousWaveletTransformNumIntegration &wt) const | PeakPickerCWT | protected
getSubsections() const | DefaultParamHandler |
GUI enum value | ProgressLogger |
initializeWT_(ContinuousWaveletTransformNumIntegration &wt, const double peak_bound_in, double &peak_bound_ms_cwt) const | PeakPickerCWT | protected
last_invoke_ | ProgressLogger | mutable protected
LogType enum name | ProgressLogger |
logTypeToFactoryName_(LogType type) | ProgressLogger | protected static
lorentz_(const double height, const double lambda, const double pos, const double x) const | PeakPickerCWT | inline protected
nextProgress() const | ProgressLogger |
noise_level_ | PeakPickerCWT | protected
NONE enum value | ProgressLogger |
OpenMS::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other) | ProgressLogger |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual
optimization_ | PeakPickerCWT | protected
param_ | DefaultParamHandler | protected
peak_bound_ | PeakPickerCWT | protected
peak_bound_ms2_level_ | PeakPickerCWT | protected
peak_corr_bound_ | PeakPickerCWT | protected
PeakIterator typedef | PeakPickerCWT |
PeakPickerCWT() | PeakPickerCWT |
pick(const MSSpectrum &input, MSSpectrum &output) const | PeakPickerCWT |
pickExperiment(const PeakMap &input, PeakMap &output) | PeakPickerCWT |
ProgressLogger() | ProgressLogger |
ProgressLogger(const ProgressLogger &other) | ProgressLogger |
radius_ | PeakPickerCWT | protected
recursion_depth_ | ProgressLogger | protected static
scale_ | PeakPickerCWT | protected
setLogType(LogType type) const | ProgressLogger |
setName(const String &name) | DefaultParamHandler |
setParameters(const Param &param) | DefaultParamHandler |
setProgress(SignedSize value) const | ProgressLogger |
signal_to_noise_ | PeakPickerCWT | protected
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger |
subsections_ | DefaultParamHandler | protected
two_d_optimization_ | PeakPickerCWT | protected
type_ | ProgressLogger | mutable protected
updateMembers_() override | PeakPickerCWT | protected virtual
warn_empty_defaults_ | DefaultParamHandler | protected
~DefaultParamHandler() | DefaultParamHandler | virtual
~PeakPickerCWT() override | PeakPickerCWT |
~ProgressLogger() | ProgressLogger |