| OpenMS 2.5.0

### - m -

- m : IDBoostGraph::dfs_ccsplit_visitor
- m_ : mean_and_stddev
- m_2H : RNPxlReportRow
- m_3H : RNPxlReportRow
- m_4H : RNPxlReportRow
- m_data : EGHFitter1D::EGHFitterFunctor , EGHTraceFitter::EGHTraceFunctor , EmgFitter1D::EgmFitterFunctor , GaussTraceFitter::GaussTraceFunctor , GumbelMaxLikelihoodFitter::GumbelDistributionFunctor , OptimizePick::OptPeakFunctor , TwoDOptimization::TwoDOptFunctor
- m_features : MockMRMFeature
- m_H : RNPxlReportRow
- m_inputs : LevMarqFitter1D::GenericFunctor , GumbelMaxLikelihoodFitter::Functor< _Scalar, NX, NY > , OptimizePick::OptPeakFunctor , TraceFitter::GenericFunctor , TwoDOptimization::TwoDOptFunctor
- m_intensity : MockFeature , MockMRMFeature
- m_intensity_vec : MockFeature
- m_library_intensities : MockTransitionGroup
- m_native_ids : MockTransitionGroup
- m_precursor_features : MockMRMFeature
- m_rt : MockFeature , MockMRMFeature
- m_rt_vec : MockFeature
- m_size : MockTransitionGroup
- m_sn_value : MockSignalToNoise
- m_values : LevMarqFitter1D::GenericFunctor , GumbelMaxLikelihoodFitter::Functor< _Scalar, NX, NY > , OptimizePick::OptPeakFunctor , TraceFitter::GenericFunctor , TwoDOptimization::TwoDOptFunctor
- m_weights : GumbelMaxLikelihoodFitter::GumbelDistributionFunctor
- magnetic_field_strength_ : MassAnalyzer
- magnetic_fs_ : MassAnalyzerVisualizer
- main_score : PeptideHit::PepXMLAnalysisResult
- mainlayout_ : BaseVisualizerGUI
- major_version_ : MascotXMLHandler
- maldi_probabilities_ : IonizationSimulation
- manager_ : MascotRemoteQuery , NetworkGetRequest
- manhatt_score_dia : OpenSwath_Scores
- map_ : FeatureFinderAlgorithm , FeatureFinderAlgorithmPicked , FeatureFinderAlgorithmSH , FeatureXMLFile , INIUpdater , TOPPASResources
- map_as_2d_disabled_ : TOPPViewOpenDialog
- map_index_ : FeatureHandle , GridFeature , KDTreeFeatureMaps
- map_label_ : FeatureDeconvolution , MetaboliteFeatureDeconvolution
- map_label_inverse_ : FeatureDeconvolution , MetaboliteFeatureDeconvolution
- map_multiple_assays_ : MRMMapping
- map_points_ : ConvexHull2D
- map_precursor_to_chrom_idx_cache_ : SpectraViewWidget
- map_to_vec_index_ : IsobaricNormalizer
- mapping : MappingParam
- mapping_ : MzMLHandler , SemanticValidator
- mapping_rules_ : CVMappings
- mapping_tolerance_ : FeatureFinderIdentificationAlgorithm
- margin_ : AxisWidget , HistogramWidget , MultiGradientSelector
- marker_ions : RNPxlReportRow
- markers_ : MarkerMower
- mascot_xml_ : MascotRemoteQuery
- mass : AccurateMassSearchEngine::MappingEntry_ , IMSIsotopeDistribution::Peak , MS1Signal , PepXMLFile::AminoAcidModification
- mass2aa_ : Tagger
- mass_ : AdductInfo , CentroidPeak , Compomer , Modification , Sample
- mass_analyzers_ : Instrument
- mass_decomp_algorithm_ : CompNovoIdentificationBase
- mass_delta : MzIdentMLDOMHandler::ModificationParam
- mass_diff : SIPPeptide
- mass_diff_ : ChargePair
- mass_error_ppm_ : MassTraceDetection
- mass_error_unit_ : AccurateMassSearchEngine
- mass_error_value_ : AccurateMassSearchEngine
- mass_in_lcms_ : IntegerMassDecomposer< ValueType, DecompositionValueType >
- mass_mappings_ : AccurateMassSearchEngine
- mass_shift_ : Tagging
- mass_shift_index_ : MultiplexIsotopicPeakPattern
- mass_shifts_ : MultiplexIsotopicPeakPattern
- mass_theo : SIPPeptide
- mass_to_charge : MzTabPeptideSectionRow
- mass_tolerance_ : ConsensusIDAlgorithmPEPIons
- mass_trace_intensities_ : AccurateMassSearchResult
- mass_type : DBSearchParam , ProteinIdentification::SearchParameters
- mass_type_ : MascotInfile , ProteinIdentificationVisualizer
- mass_type_fragment_ : SequestInfile
- mass_type_parent_ : SequestInfile
- mass_window_width_ : FeatureFinderAlgorithmPicked , IsotopeDistributionCache
- massdev_score : OpenSwath_Scores
- massdiff : PepXMLFile::AminoAcidModification
- masses_ : PrecursorIonSelectionPreprocessing
- massIDs : AccurateMassSearchEngine::MappingEntry_
- massTolDa_ : SuperHirnParameters
- massTolPpm_ : SuperHirnParameters
- MASTER_ID : LCMS , SHFeature
- match_odds : OPXLDataStructs::CrossLinkSpectrumMatch
- match_odds_alpha : OPXLDataStructs::CrossLinkSpectrumMatch
- match_odds_beta : OPXLDataStructs::CrossLinkSpectrumMatch
- match_peak_allowed_error_ : SequestInfile
- match_peak_count_ : SequestInfile
- match_peak_tolerance_ : SequestInfile
- matched_feature_list : SHFeature
- matched_linear_alpha : OPXLDataStructs::CrossLinkSpectrumMatch
- matched_linear_beta : OPXLDataStructs::CrossLinkSpectrumMatch
- matched_whitelist_ : FuzzyStringComparator
- matched_xlink_alpha : OPXLDataStructs::CrossLinkSpectrumMatch
- matched_xlink_beta : OPXLDataStructs::CrossLinkSpectrumMatch
- matches : MorpheusScore::Result
- matching_hmdb_ids_ : AccurateMassSearchResult
- matching_index_ : AccurateMassSearchResult
- matching_peaks : TwoDOptimization::Data
- matching_peaks_ : TwoDOptimization
- matching_score_ : SpectralMatch
- matching_spectrum_idx_ : SpectralMatch
- matrix_ : DistanceMatrix< Value >
- max : FeatureFinderAlgorithmPickedHelperStructs::TheoreticalIsotopePattern , LayerStatisticsDialog::MetaStatsValue_ , SummaryStatistics< T > , PeakPickerCWT::PeakArea_
- max_ : AxisWidget , BiGaussModel , EGHModel , EmgModel , GaussModel , InIntensityRange< PeakType > , InMzRange< PeakType > , InRTRange< SpectrumType > , DIntervalBase< D > , Histogram< ValueType, BinSizeType >
- max_AA_per_mod_per_peptide_ : SequestInfile
- max_adduct_charge_ : IonizationSimulation
- max_ambAA : Pattern< TNeedle, FuzzyAC >
- max_bias_ : AbsoluteQuantitation
- max_charge_ : FeatureFinderAlgorithmIsotopeWavelet , IsotopeWavelet , IsotopeWaveletTransform< PeakType > , LayerStatisticsDialog , Tagger
- max_cleavages_ : IDFilter::PeptideDigestionFilter
- max_code_length_ : RibonucleotideDB
- max_correctly_ : PosteriorErrorProbabilityModel
- max_decomp_weight_ : CompNovoIdentificationBase
- max_depth_decrease : Spawn< TNeedle >
- max_diff_mz_ : QTClusterFinder
- max_diff_ppm : FeatureDistance::DistanceParams_
- max_diff_rt_ : QTClusterFinder
- max_difference : FeatureDistance::DistanceParams_
- max_distance_ : QTCluster
- max_elements_ : LayerStatisticsDialog
- max_energy_ : IsInCollisionEnergyRange< SpectrumType >
- max_feature_intersection_ : FeatureFinderAlgorithmPicked
- max_float : Param::ParamEntry , ParameterInformation
- max_fwhm_ : ElutionPeakDetection
- max_gap_ : Tagger
- max_gd_iter_ : EmgGradientDescent
- max_incorrectly_ : PosteriorErrorProbabilityModel
- max_int : Param::ParamEntry , ParameterInformation
- max_intensity : IDDecoyProbability::Transformation_
- max_intensity_ : FeatureDistance , LayerStatisticsDialog , SignalToNoiseEstimatorMeanIterative< Container > , SignalToNoiseEstimatorMedian< Container >
- max_intensity_bin : IDDecoyProbability::Transformation_
- max_inter_scan_distance : ProcessData
- max_internal_cleavage_sites_ : SequestInfile
- max_isotope_ : CoarseIsotopePatternGenerator , CompNovoIdentificationBase , ExtendedIsotopeFitter1D , ExtendedIsotopeModel , IsotopeFitter1D , IsotopeModel , SimpleTSGXLMS , TheoreticalSpectrumGenerator , TheoreticalSpectrumGeneratorXLMS
- max_isotope_probability_ : TheoreticalSpectrumGenerator
- max_iteration_ : LevMarqFitter1D , OptimizePick , PrecursorIonSelection , TwoDOptimization
- max_iterations_ : TraceFitter
- max_iters_ : AbsoluteQuantitation
- max_length : DBSearchParam
- max_length_ : TOPPASLogWindow
- max_missing_trace_peaks_ : FeatureFinderAlgorithmPicked
- max_mmAA : Pattern< TNeedle, FuzzyAC >
- max_mods_per_peptide_ : ModificationDefinitionsSet , SequestInfile
- max_mz_ : CompNovoIdentificationBase
- max_mz_cutoff_ : IsotopeWaveletTransform< PeakType >
- max_neutrals_ : MassExplainer
- max_num_peaks_considered_ : MapAlignmentAlgorithmPoseClustering
- max_num_peaks_per_pattern_ : IsotopeWaveletTransform< PeakType >
- max_number_aa_per_decomp_ : CompNovoIdentificationBase
- max_number_pivot_ : CompNovoIdentificationBase
- max_occurrences_ : ModificationDefinition
- max_pairwise_log_fc_ : MapAlignmentAlgorithmKD
- max_peak : FeatureFinderAlgorithmPickedHelperStructs::MassTrace
- max_peak_distance_ : TwoDOptimization
- max_pep_lens_ : SequestOutfile
- max_peptide_length_ : AScore
- max_permutations_ : AScore
- max_precursor_charge_ : XQuestResultXMLHandler , OpenPepXLAlgorithm , OpenPepXLLFAlgorithm , XTandemInfile
- max_precursor_isotope_deviation_ : IsobaricChannelExtractor
- max_quality_ : LayerStatisticsDialog
- max_rt : ConfidenceScoring::RTNorm_ , FeatureFinderAlgorithmPickedHelperStructs::MassTrace
- max_rt_span_ : FeatureFinderAlgorithmPicked
- max_scan_size_ : IsotopeWaveletTransform< PeakType >
- max_score : IDDecoyProbability::Transformation_
- max_score_ : XQuestResultXMLHandler , PrecursorIonSelection , XFDRAlgorithm , XQuestResultXMLFile
- max_series_ : SpectrumAnnotator
- max_size_ : NucleicAcidSearchEngine::HasInvalidLength , IsInIsolationWindowSizeRange< SpectrumType >
- max_span_ : MassExplainer
- max_subscore_number_ : CompNovoIdentificationBase
- max_tag_length_ : Tagger
- MAX_TIME : LogStreamBuf
- max_trace : FeatureFinderAlgorithmPickedHelperStructs::MassTraces
- max_trace_length_ : MassTraceDetection
- max_valid_evalue_ : XTandemInfile
- max_variable_mods_per_peptide_ : OpenPepXLAlgorithm , OpenPepXLLFAlgorithm
- maxFeatureChrg_ : SuperHirnParameters
- maxFeatureMZ_ : SuperHirnParameters
- maximal_data_pool_size_ : PeakFileOptions
- maximal_mz_measurement_limit_ : IonizationSimulation
- maxInterScanRetentionTimeDistance_ : SuperHirnParameters
- maxptmsize_ : InspectInfile
- maxTR_ : SuperHirnParameters
- mc_result_ : MissedCleavages
- MDF_ALL : SpectrumMetaDataLookup
- MDF_MSLEVEL : SpectrumMetaDataLookup
- MDF_NATIVEID : SpectrumMetaDataLookup
- MDF_PRECURSORCHARGE : SpectrumMetaDataLookup
- MDF_PRECURSORMZ : SpectrumMetaDataLookup
- MDF_PRECURSORRT : SpectrumMetaDataLookup
- MDF_RT : SpectrumMetaDataLookup
- MDF_SCANNUMBER : SpectrumMetaDataLookup
- me_ : IsotopeWavelet
- mean : SummaryStatistics< T > , SignalToNoiseEstimator< Container >::GaussianEstimate
- mean_ : BackgroundIntensityBin , IsotopeModel , BasicStatistics< RealT >
- mean_residuals_ : LinearRegression
- measure_ : IDMapper
- measurement_start_ : Spectrum2DCanvas , SpectrumCanvas
- measurement_start_point_ : Spectrum1DCanvas
- median : SummaryStatistics< T >
- medium_channel_arginine_label_ : SILACLabeler
- MEDIUM_CHANNEL_ID_ : O18Labeler
- medium_channel_label_ : ICPLLabeler
- medium_channel_lysine_label_ : SILACLabeler
- MEDIUM_FEATURE_MAPID_ : ICPLLabeler , SILACLabeler
- mem_after : SysInfo::MemUsage
- mem_after_peak : SysInfo::MemUsage
- mem_before : SysInfo::MemUsage
- mem_before_peak : SysInfo::MemUsage
- message_label_ : TOPPASBase , TOPPViewBase
- message_level : LPWrapper::SolverParam
- meta : MzMLHandlerHelper::BinaryData , SimProtein
- meta_ : MetaInfoInterface
- meta_array_stats_ : LayerStatisticsDialog
- meta_data_ : MzTab
- meta_id_descs_ : MzDataHandler
- meta_indices_ : DataFilters
- meta_ms_experiment_ : CachedmzML , OnDiscMSExperiment
- meta_name : DataFilters::DataFilter
- meta_stats_ : LayerStatisticsDialog
- meta_value_qc : MRMFeatureQC::ComponentGroupQCs , MRMFeatureQC::ComponentQCs
- metabuttons_ : MetaInfoVisualizer
- metadata_ : SpectrumMetaDataLookup
- metadata_only_ : FeatureFileOptions , PeakFileOptions
- metainfodescription_name_ : MetaInfoDescriptionVisualizer
- metainfoptr_ : MetaInfoVisualizer
- metalabels_ : MetaInfoVisualizer
- metavalue_key_ : HasMetaValue< MetaContainer >
- methionine_cleavage_ : IDFilter::DigestionFilter
- method_ : Normalizer , PeakPickerMRM
- method_of_combination_ : AcquisitionInfo
- methods_ : HasActivationMethod< SpectrumType >
- metric_ : GridBasedClustering< Metric >
- mi_contrast_matrix_ : MRMScoring
- mi_matrix_ : MRMScoring
- mi_precursor_combined_matrix_ : MRMScoring
- mi_precursor_contrast_matrix_ : MRMScoring
- mi_precursor_matrix_ : MRMScoring
- mi_score : OpenSwath_Scores
- MIC : MorpheusScore::Result
- mids : SiriusMSFile::CompoundInfo
- min : LayerStatisticsDialog::MetaStatsValue_ , SummaryStatistics< T >
- min_ : AxisWidget , BiGaussModel , EGHModel , EmgModel , GaussModel , InIntensityRange< PeakType > , InMzRange< PeakType > , InRTRange< SpectrumType > , DIntervalBase< D > , Histogram< ValueType, BinSizeType >
- min_aa_weight_ : CompNovoIdentificationBase
- min_charge_ : LayerStatisticsDialog , Tagger
- min_cleavages_ : IDFilter::PeptideDigestionFilter
- min_correlation_coefficient_ : AbsoluteQuantitation
- min_detect_ : DetectabilitySimulation
- min_element_ : DistanceMatrix< Value >
- min_elements_ : LayerStatisticsDialog
- min_energy_ : IsInCollisionEnergyRange< SpectrumType >
- min_float : Param::ParamEntry , ParameterInformation
- min_fwhm_ : ElutionPeakDetection
- min_gap_ : Tagger
- min_int : Param::ParamEntry , ParameterInformation
- min_intensity_ : LayerStatisticsDialog
- min_isotope_fit_ : FeatureFinderAlgorithmPicked
- min_length : DBSearchParam
- min_match_score_ : TargetedSpectraExtractor
- MIN_MZ_ : BinnedSpectrum
- min_mz_ : CompNovoIdentificationBase
- min_peak_width_ : FeatureFinderIdentificationAlgorithm , MRMTransitionGroupPicker
- min_pep_ids_ : PrecursorIonSelection
- min_points_ : AbsoluteQuantitation
- min_precursor_charge_ : XQuestResultXMLHandler , OpenPepXLAlgorithm , OpenPepXLLFAlgorithm
- min_precursor_intensity_ : IsobaricChannelExtractor
- min_precursor_purity_ : IsobaricChannelExtractor
- min_prob_ : IsotopePatternGenerator
- min_qual_ : MRMTransitionGroupPicker
- min_quality_ : LayerStatisticsDialog
- min_reporter_intensity_ : IsobaricChannelExtractor
- min_required_elements_ : SignalToNoiseEstimatorMeanIterative< Container > , SignalToNoiseEstimatorMedian< Container >
- min_rt : ConfidenceScoring::RTNorm_
- min_rt_span_ : FeatureFinderAlgorithmPicked
- min_run_occur_ : MapAlignmentAlgorithmIdentification
- min_sample_rate_ : MassTraceDetection
- min_score : IDDecoyProbability::Transformation_
- min_score_ : XQuestResultXMLHandler , MapAlignmentAlgorithmIdentification , XFDRAlgorithm , XQuestResultXMLFile
- min_select_score_ : TargetedSpectraExtractor
- min_shared_ : ConsensusIDAlgorithmPEPIons
- min_size_ : NucleicAcidSearchEngine::HasInvalidLength , IsInIsolationWindowSizeRange< SpectrumType >
- min_spacing_ : IsotopeWaveletTransform< PeakType >
- min_spectra_ : FeatureFinderAlgorithmPicked
- min_support_ : ConsensusIDAlgorithm
- min_tag_length_ : Tagger
- min_trace_length_ : MassTraceDetection
- min_trace_score_ : FeatureFinderAlgorithmPicked
- min_upper_edge_dist : ChromExtractParams
- minFeatureChrg_ : SuperHirnParameters
- minFeatureMZ_ : SuperHirnParameters
- minimal_mz_measurement_limit_ : IonizationSimulation
- MINIMAL_PEP_PROPHET_THERSHOLD : LCMS
- minimal_protein_list_accessions_ : PSProteinInference
- minIntensity_ : SuperHirnParameters
- minNbClusterMembers_ : SuperHirnParameters
- minor_version_ : MascotXMLHandler
- minTR_ : SuperHirnParameters
- mip_gap : LPWrapper::SolverParam
- mirror_mode_ : Spectrum1DCanvas
- mismatches_seen : Spawn< TNeedle >
- mismatchscore_ : MapAlignmentAlgorithmSpectrumAlignment
- missed_cleavages : DBSearchParam , ProteinIdentification::SearchParameters
- missed_cleavages_ : EnzymaticDigestion , MascotInfile , MultiplexDeltaMassesGenerator , OpenPepXLAlgorithm , OpenPepXLLFAlgorithm , ProteinIdentificationVisualizer
- missing_ : PeakPickerHiRes , PeakPickerMaxima
- missing_decoy_action_ : PeptideIndexing
- mixture_ : MSstatsFile::MSstatsTMTLine_
- ml1_ : AcqusHandler
- ml1s_ : TOFCalibration
- ml2_ : AcqusHandler
- ml2s_ : TOFCalibration
- ml3_ : AcqusHandler
- ml3s_ : TOFCalibration
- mm_max_ : PeptideIndexing
- mod_ : ModificationDefinition
- mod_combinations : RNPxlModificationMassesResult
- mod_def_set_ : OMSSAXMLFile , XTandemXMLFile
- mod_group_map_ : MascotGenericFile
- mod_identifier_ : MzTabModification
- MOD_LIST : MS2Info
- mod_masses : RNPxlModificationMassesResult
- mod_tol_ : PepXMLFile
- mode_ : HasScanMode< SpectrumType >
- model_ : Instrument , InstrumentVisualizer , PSLPFormulation , SimpleSVM , SVMWrapper , TransformationDescription , TransformationModelLowess
- model_data_ : EnzymaticDigestionLogModel
- model_param_ : MapAlignmentAlgorithmTreeGuided
- model_type_ : MapAlignmentAlgorithmTreeGuided , TransformationDescription , TransformationXMLFile
- modifiable : LayerData
- modification : MzTabModificationMetaData
- modification_ : UnimodXMLHandler , Residue
- modification_names_ : ModificationsDB
- modification_param_cvs : MzIdentMLDOMHandler::ModificationParam
- modification_parameter : MzIdentMLDOMHandler::SpectrumIdentificationProtocol
- modificationAA_ : ModificationVisualizer , TaggingVisualizer
- modificationmass_ : ModificationVisualizer , TaggingVisualizer
- modificationname_ : ModificationVisualizer , TaggingVisualizer
- modifications : MzTabNucleicAcidSectionRow , MzTabOligonucleotideSectionRow , MzTabOSMSectionRow , MzTabPeptideSectionRow , MzTabProteinSectionRow , MzTabPSMSectionRow , MzTabSmallMoleculeSectionRow , LightCompound , Peptide
- modifications_ : UnimodXMLHandler , OMSSAXMLFile , ProteinHit , XTandemInfile
- modifications_fixed_ : SimpleSearchEngineAlgorithm
- modifications_max_variable_mods_per_peptide_ : SimpleSearchEngineAlgorithm
- modifications_per_peptide_ : InspectInfile
- modifications_variable_ : SimpleSearchEngineAlgorithm
- modificationspecificity_ : ModificationVisualizer , TaggingVisualizer
- modified : LayerData
- modified_ : ParamEditor
- modified_peptides_ : MascotXMLHandler
- modified_residues_ : ResidueDB
- modify_strings_ : SVOutStream
- mods : Peptide
- mods_ : MascotInfile , ModificationsDB , MSQuantifications::Assay , PepNovoInfile
- mods_and_keys_ : PepNovoInfile
- mods_map_ : OMSSAXMLFile
- mods_to_num_ : OMSSAXMLFile
- mol_multiplier_ : AdductInfo
- molecular_formula : CsiFingerIdMzTabWriter::CsiAdapterHit , Compound
- molecule_type : DBSearchParam , ParentMolecule
- mono_mass : MS2Info
- mono_mass_ : UnimodXMLHandler , ResidueModification , Ribonucleotide
- mono_mass_delta : Peptide::Modification
- MONO_MZ : MS2Info , SHFeature
- MONO_MZ_END : SHFeature
- MONO_MZ_ORIGINAL : SHFeature
- MONO_MZ_START : SHFeature
- mono_weight_ : Element , Residue
- monoisotopic_mz_ : ExtendedIsotopeFitter1D , ExtendedIsotopeModel , IsotopeModel
- months : XQuestResultXMLHandler
- most_intense_ms2_ : SiriusAdapterAlgorithm
- mouse_move_begin_ : Spectrum3DOpenGLCanvas
- mouse_move_end_ : Spectrum3DOpenGLCanvas
- moving_annotations_ : Spectrum1DCanvas
- moving_splitter_ : HistogramWidget
- mp_ : SvmTheoreticalSpectrumGenerator
- mrm_features_ : MRMTransitionGroup< ChromatogramType, TransitionType >
- mrmfeature_ : MRMFeatureOpenMS
- ms1 : SwathMap
- ms1_consumer_ : CachedSwathFileConsumer , MzMLSwathFileConsumer
- ms1_im_ : SwathMapMassCorrection
- ms1_isotope_correlation : OpenSwath_Scores
- ms1_isotope_overlap : OpenSwath_Scores
- ms1_map_ : FullSwathFileConsumer , MRMFeatureFinderScoring , OpenSwathWorkflowBase
- ms1_mi_combined_score : OpenSwath_Scores
- ms1_mi_contrast_score : OpenSwath_Scores
- ms1_mi_score : OpenSwath_Scores
- ms1_ppm_score : OpenSwath_Scores
- ms1_spectra_seen_ : SwathQC
- ms1_xcorr_coelution_combined_score : OpenSwath_Scores
- ms1_xcorr_coelution_contrast_score : OpenSwath_Scores
- ms1_xcorr_coelution_score : OpenSwath_Scores
- ms1_xcorr_shape_combined_score : OpenSwath_Scores
- ms1_xcorr_shape_contrast_score : OpenSwath_Scores
- ms1_xcorr_shape_score : OpenSwath_Scores
- ms1FeatureClustering_ : SuperHirnParameters
- ms1FeatureMergingTrTolerance_ : SuperHirnParameters
- ms1PeakAreaTrResolution_ : SuperHirnParameters
- ms1TRResolution_ : SuperHirnParameters
- ms2_included_ : Ms2SpectrumStats
- MS2_MZ_TOLERANCE : MS2ConsensusSpectrum
- ms2_presence : Ms2SpectrumStats::ScanEvent
- MS2_SCANS : SHFeature
- MS2_TYPE_TAG : MS2Info
- MS2FragmentPeaks : MS2ConsensusSpectrum
- MS2Scans : ClusteredMS2ConsensusSpectrum
- MS2TraceFeature : SHFeature
- ms_data_ : FeatureFinderIdentificationAlgorithm
- ms_experiment_ : SpectrumAccessOpenMS
- ms_level : SpectrumMeta , InternalCalibration::LockMass , SpectrumMetaDataLookup::SpectrumMetaData , OSSpectrumMeta
- ms_level_ : MSSpectrum
- ms_levels_ : MSExperiment , PeakFileOptions , PeakPickerHiRes
- ms_run : MzTabMetaData
- ms_run_ : MzTabSpectraRef
- ms_run_path_ : XQuestResultXMLHandler
- ms_run_ref : MzTabAssayMetaData
- msd_group : ProteinResolver::PeptideEntry , ProteinResolver::ProteinEntry
- msd_groups : ProteinResolver::ISDGroup
- msds : ProteinResolver::ResolverResult
- msfile_section_ : ExperimentalDesign
- msgf_id_ : DigestionEnzymeProtein
- msp_ : MSPGenericFile_friend
- msq_ : MzQuantMLHandler
- mt_snr_filtering_ : ElutionPeakDetection
- mu_ : PrecursorIonSelectionPreprocessing
- multi_component_group_qc_report_ : MRMFeatureFilter
- multicharge_ : InspectInfile
- mw_ : HistogramDialog
- mz : ChromatogramExtractorAlgorithm::ExtractionCoordinates , CsiFingerIdMzTabWriter::CsiAdapterIdentification , FeatureFinderAlgorithmIsotopeWavelet::BoxElement , DataQuery , RNPxlFragmentAnnotationHelper::FragmentAnnotationDetail_ , InternalCalibration::LockMass , IsotopeWaveletTransform< PeakType >::BoxElement
- MZ : MSPeak
- mz : PeakCandidate , PeptideHit::PeakAnnotation , SimpleTSGXLMS::SimplePeak , SiriusMzTabWriter::SiriusAdapterIdentification
- MZ_ : InclusionExclusionList::IEWindow
- mz_ : MascotInfile , MultiplexFilteredPeak , MultiplexSatelliteProfile , PeptideIdentification , PepXMLFile , PrecursorVisualizer , Product , TraMLProduct
- mz_32_bit_ : PeakFileOptions
- mz_as_ppm_ : InclusionExclusionList::WindowDistance_
- MZ_AXIS_TITLE : SpectrumWidget
- MZ_begin : IsotopeWaveletTransform< PeakType >::BoxElement
- MZ_CLUSTER : ProcessData
- mz_correction_function_ : SwathMapMassCorrection
- MZ_end : IsotopeWaveletTransform< PeakType >::BoxElement
- mz_error_mean_ : RawMSSignalSimulation
- mz_error_ppm_ : AccurateMassSearchResult
- mz_error_stddev_ : RawMSSignalSimulation
- mz_error_unit_ : MetaboliteSpectralMatching
- mz_extraction_window : ChromExtractParams
- mz_extraction_window_ : SwathMapMassCorrection
- mz_extraction_window_ppm_ : SwathMapMassCorrection
- mz_heavy_ : XQuestResultXMLHandler
- mz_idx_ : MultiplexFilteredPeak , MultiplexSatelliteCentroided
- mz_label_ : TOPPViewBase
- mz_left_ : InPrecursorMZRange< SpectrumType >
- mz_light_ : XQuestResultXMLHandler
- mz_max : PeakPickerHiRes::PeakBoundary , PeakPickerMaxima::PeakCandidate
- mz_max_ : InclusionExclusionList::WindowDistance_ , PeakWidthEstimator , SpectraMerger::SpectraDistance_
- mz_min : PeakPickerHiRes::PeakBoundary
- mz_min_ : PeakWidthEstimator
- mz_model : Summary
- mz_position : PeakShape
- mz_ppm_ : FeatureGroupingAlgorithmKD , MapAlignmentAlgorithmKD
- mz_precursor : ChromatogramExtractorAlgorithm::ExtractionCoordinates
- mz_range_ : FeatureFileOptions , PeakFileOptions
- mz_raw_ : MzCalibration
- mz_ref_ : MzCalibration
- mz_right_ : InPrecursorMZRange< SpectrumType >
- mz_score : FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern
- mz_shifts_ : MultiplexIsotopicPeakPattern
- mz_start : SignalToNoiseEstimatorMedianRapid::NoiseEstimator
- mz_stdev : Summary
- mz_tab_id : MzTabMetaData
- mz_tab_mode : MzTabMetaData
- mz_tab_type : MzTabMetaData
- mz_tab_version : MzTabMetaData
- mz_theo : SIPPeptide
- mz_to_x_axis_ : SpectrumCanvas
- mz_tol_ : FeatureGroupingAlgorithmKD , MapAlignmentAlgorithmKD
- mz_tolerance_ : IDMapper , MultiplexFiltering , PrecursorIonSelection , TargetedSpectraExtractor
- mz_tolerance_unit_ : PrecursorIonSelection
- mz_tolerance_unit_in_ppm_ : MultiplexFiltering
- mz_unit_is_Da_ : TargetedSpectraExtractor
- mz_window_ : FeatureFinderIdentificationAlgorithm
- mz_window_ppm_ : FeatureFinderIdentificationAlgorithm
- mzClusters : MS1FeatureMerger
- mzCoord_ : BackgroundIntensityBin
- mzid_parser_ : MzIdentMLDOMHandler
- mzIsotopesStDev_ : ConsensusIsotopePattern
- mzs_ : FIAMSDataProcessor
- mzTolPpm_ : SuperHirnParameters