| OpenMS 2.5.0

TransformationModelInterpolated.h
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31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Stephan Aiche, Hendrik Weisser $
33 // --------------------------------------------------------------------------
34
35 #pragma once
36
37 #include <OpenMS/config.h>
38
39 #include <OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h>
40 #include <OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLinear.h>
41
42 namespace OpenMS
43 {
69 class OPENMS_DLLAPI TransformationModelInterpolated :
70 public TransformationModel
71 {
72 public:
73
82 TransformationModelInterpolated(const DataPoints& data, const Param& params);
83 TransformationModelInterpolated(const std::vector<std::pair<double,double>>& data, const Param& params, bool preprocess);
84
86 ~TransformationModelInterpolated() override;
87
95 double evaluate(double value) const override;
96
98 static void getDefaultParameters(Param& params);
99
107 class Interpolator
108 {
109 public:
110
117 virtual void init(std::vector<double>& x, std::vector<double>& y) = 0;
118
126 virtual double eval(const double& x) const = 0;
127
131 virtual ~Interpolator() {}
132 };
133
134 private:
136 std::vector<double> x_;
137
139 std::vector<double> y_;
140
142 Interpolator* interp_;
143
145 TransformationModelLinear* lm_front_;
146
148 TransformationModelLinear* lm_back_;
149
151 void preprocessDataPoints_(const DataPoints& data);
152
154 void preprocessDataPoints_(const std::vector<std::pair<double,double>>& data);
155 };
156
157 } // namespace
158
OpenMS::TransformationModelInterpolated::interp_
Interpolator * interp_
Interpolation function.
Definition: TransformationModelInterpolated.h:142
OpenMS::TransformationModelInterpolated::Interpolator
The class defines a generic interpolation technique used in the TransformationModelInterpolated.
Definition: TransformationModelInterpolated.h:107
TransformationModelLinear.h
OpenMS::TransformationModel::DataPoints
std::vector< DataPoint > DataPoints
Vector of coordinate pairs.
Definition: TransformationModel.h:90
OpenMS::TransformationModelInterpolated
Interpolation model for transformations.
Definition: TransformationModelInterpolated.h:69
OpenMS::TransformationModel
Base class for transformation models.
Definition: TransformationModel.h:53
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
OpenMS::TransformationModelInterpolated::lm_back_
TransformationModelLinear * lm_back_
Linear model for extrapolation (back)
Definition: TransformationModelInterpolated.h:148
OpenMS::TransformationModelLinear
Linear model for transformations.
Definition: TransformationModelLinear.h:58
OpenMS::TransformationModelInterpolated::lm_front_
TransformationModelLinear * lm_front_
Linear model for extrapolation (front)
Definition: TransformationModelInterpolated.h:145
TransformationModel.h
OpenMS::TransformationModelInterpolated::x_
std::vector< double > x_
Data coordinates x.
Definition: TransformationModelInterpolated.h:136
OpenMS::TransformationModelInterpolated::Interpolator::~Interpolator
virtual ~Interpolator()
d&#39;tor.
Definition: TransformationModelInterpolated.h:131
OpenMS::Param
Management and storage of parameters / INI files.
Definition: Param.h:73
OpenMS::TransformationModelInterpolated::y_
std::vector< double > y_
Data coordinates y.
Definition: TransformationModelInterpolated.h:139