| OpenMS 2.5.0

NASequence Member List

This is the complete list of members for NASequence, including all inherited members.

AIon enum value | NASequence |
AminusB enum value | NASequence |
begin() | NASequence | inline
begin() const | NASequence | inline
BIon enum value | NASequence |
BIonMinusH20 enum value | NASequence |
BIonMinusNH3 enum value | NASequence |
cbegin() const | NASequence | inline
cend() const | NASequence | inline
CIon enum value | NASequence |
clear() | NASequence |
ConstRibonucleotidePtr typedef | NASequence |
DIon enum value | NASequence |
empty() const | NASequence |
end() | NASequence | inline
end() const | NASequence | inline
five_prime_ | NASequence | private
FivePrime enum value | NASequence |
fromString(const String &s) | NASequence | static
fromString(const char *s) | NASequence | static
Full enum value | NASequence |
get(size_t index) | NASequence | inline
getAverageWeight(NASFragmentType type=Full, Int charge=0) const | NASequence |
getFivePrimeMod() const | NASequence |
getFormula(NASFragmentType type=Full, Int charge=0) const | NASequence |
getMonoWeight(NASFragmentType type=Full, Int charge=0) const | NASequence |
getPrefix(Size length) const | NASequence |
getSequence() const | NASequence | inline
getSequence() | NASequence | inline
getSubsequence(Size start=0, Size length=Size(-1)) const | NASequence |
getSuffix(Size length) const | NASequence |
getThreePrimeMod() const | NASequence |
hasFivePrimeMod() const | NASequence |
hasThreePrimeMod() const | NASequence |
Internal enum value | NASequence |
NASequence()=default | NASequence |
NASequence(const NASequence &)=default | NASequence |
NASequence(NASequence &&)=default | NASequence |
NASequence(std::vector< const Ribonucleotide *> s, const RibonucleotideChainEnd *five_prime, const RibonucleotideChainEnd *three_prime) | NASequence |
NASFragmentType enum name | NASequence |
NonIdentified enum value | NASequence |
operator!=(const NASequence &rhs) const | NASequence |
operator<(const NASequence &rhs) const | NASequence |
operator<<(std::ostream &os, const NASequence &seq) | NASequence | friend
operator=(const NASequence &) &=default | NASequence |
operator=(NASequence &&) &=default | NASequence |
operator==(const NASequence &rhs) const | NASequence |
operator[](size_t index) | NASequence | inline
operator[](size_t index) const | NASequence | inline
parseMod_(const String::ConstIterator str_it, const String &str, NASequence &nas) | NASequence | private static
parseString_(const String &s, NASequence &nas) | NASequence | private static
Precursor enum value | NASequence |
seq_ | NASequence | private
set(size_t index, const Ribonucleotide *r) | NASequence |
setFivePrimeMod(const RibonucleotideChainEnd *r) | NASequence |
setSequence(const std::vector< const Ribonucleotide *> &seq) | NASequence |
setThreePrimeMod(const RibonucleotideChainEnd *r) | NASequence |
size() const | NASequence |
SizeOfNASFragmentType enum value | NASequence |
three_prime_ | NASequence | private
ThreePrime enum value | NASequence |
toString() const | NASequence |
Unannotated enum value | NASequence |
WIon enum value | NASequence |
XIon enum value | NASequence |
YIon enum value | NASequence |
YIonMinusH20 enum value | NASequence |
YIonMinusNH3 enum value | NASequence |
ZIon enum value | NASequence |
~NASequence()=default | NASequence | virtual