| OpenMS 2.5.0

### - n -

- n : EGHFitter1D::Data , EmgFitter1D::Data , RANSACParam
- n_ : LinearRegressionWithoutIntercept
- n_buffer_ : Bzip2Ifstream , GzipIfstream
- n_decoys_ : ConfidenceScoring
- n_detecting_l : MRMFeatureQC::ComponentGroupQCs
- n_detecting_u : MRMFeatureQC::ComponentGroupQCs
- n_external_features_ : FeatureFinderIdentificationAlgorithm
- n_external_peps_ : FeatureFinderIdentificationAlgorithm
- n_fractions : PeptideAndProteinQuant::Statistics
- n_heavy_l : MRMFeatureQC::ComponentGroupQCs
- n_heavy_u : MRMFeatureQC::ComponentGroupQCs
- n_hits_ : XQuestResultXMLHandler , XQuestResultXMLFile
- n_identifying_l : MRMFeatureQC::ComponentGroupQCs
- n_identifying_u : MRMFeatureQC::ComponentGroupQCs
- n_internal_features_ : FeatureFinderIdentificationAlgorithm
- n_internal_peps_ : FeatureFinderIdentificationAlgorithm
- n_isotopes_ : FeatureFinderIdentificationAlgorithm
- n_light_l : MRMFeatureQC::ComponentGroupQCs
- n_light_u : MRMFeatureQC::ComponentGroupQCs
- n_ms_files : PeptideAndProteinQuant::Statistics
- n_parts_ : SimpleSVM
- n_peaks : MorpheusScore::Result
- n_points_ : AbsoluteQuantitationMethod
- n_quantifying_l : MRMFeatureQC::ComponentGroupQCs
- n_quantifying_u : MRMFeatureQC::ComponentGroupQCs
- n_samples : PeptideAndProteinQuant::Statistics
- n_spectra_ : SpectrumLookup
- n_term_gain_ : DigestionEnzymeProtein
- n_term_mod_ : AASequence
- N_TERMINAL_AA : PeptideEvidence
- N_TERMINAL_POSITION : PeptideEvidence
- n_transitions_ : ConfidenceScoring
- n_transitions_l : MRMFeatureQC::ComponentGroupQCs
- n_transitions_u : MRMFeatureQC::ComponentGroupQCs
- na_string_ : MSstatsFile
- name : ControlledVocabulary::CVTerm , CsiFingerIdMzTabWriter::CsiAdapterHit , CVTerm::Unit , DecoyHelper::Result , IdentifiedCompound , MzIdentMLDOMHandler::AnalysisSoftware , MzIdentMLDOMHandler::DatabaseInput , SemanticValidator::CVTerm , ToolDescriptionInternal , IsobaricQuantitationMethod::IsobaricChannelInformation , ItraqConstants::ChannelInfo , LayerData , MzTabContactMetaData , MzTabInstrumentMetaData , Param::ParamEntry , Param::ParamIterator::TraceInfo , Param::ParamNode , ParameterInformation , QcMLFile::Attachment , QcMLFile::QualityParameter , RawMSSignalSimulation::ContaminantInfo
- name_ : AdductInfo , Contaminants , ControlledVocabulary , CVReference , CVTerm , DigestionEnzyme , Element , BaseException , FragmentMassError , HMMState , IdentificationHit , IMSElement , IncludeExcludeTarget , Instrument , InstrumentVisualizer , PTMXMLHandler , ItraqEightPlexQuantitationMethod , ItraqFourPlexQuantitationMethod , MetaInfoDescription , MissedCleavages , ModelDescription< D > , Ms2IdentificationRate , Ms2SpectrumStats , MSChromatogram , MSSpectrum , MzCalibration , MzTabParameter , QcMLFile , ReactionMonitoringTransition , Residue , ResidueModification , Ribonucleotide , RTAlignment , Sample , Software , TIC , TMTElevenPlexQuantitationMethod , TMTSixPlexQuantitationMethod , TMTSixteenPlexQuantitationMethod , TMTTenPlexQuantitationMethod , TOPPASToolVertex
- name_att_ : SemanticValidator
- name_of_file_ : SourceFile , SourceFileVisualizer
- name_of_MZMLtypes_ : FileTypes
- name_of_types_ : FileTypes
- name_to_counter_map_ : StreamHandler
- name_to_index_ : MetaInfoRegistry
- name_to_residue_ : CompNovoIdentificationBase
- name_to_state_ : HiddenMarkovModel
- name_to_stream_map_ : StreamHandler
- name_to_type_map_ : StreamHandler
- names_ : ElementDB , QcMLFile
- names_of_modeltype : MZTrafoModel
- names_of_quantmethod : MassTrace
- names_of_requires : QCBase
- names_of_toleranceUnit : FragmentMassError
- NamesOfAcquisitionMode : IonDetector
- NamesOfActivationMethod : Precursor
- NamesOfActivationMethodShort : Precursor
- NamesOfAnalyzerType : MassAnalyzer
- NamesOfAnnotationState : BaseFeature
- NamesOfChecksumType : SourceFile
- NamesOfInletType : IonSource
- NamesOfIonizationMethod : IonSource
- NamesOfIonOpticsType : Instrument
- NamesOfIsotopeVariant : Tagging
- NamesOfLabelType : LayerData
- NamesOfNumpressCompression : MSNumpressCoder
- NamesOfPeakMassType : ProteinIdentification
- NamesOfPolarity : IonSource
- NamesOfProcessingAction : DataProcessing
- NamesOfQuantTypes : MSQuantifications
- NamesOfReflectronState : MassAnalyzer
- NamesOfResolutionMethod : MassAnalyzer
- NamesOfResolutionType : MassAnalyzer
- NamesOfSampleState : Sample
- NamesOfScanDirection : MassAnalyzer
- NamesOfScanLaw : MassAnalyzer
- NamesOfScanMode : InstrumentSettings
- NamesOfSpecificity : EnzymaticDigestion
- NamesOfSpecificityType : Modification
- NamesOfSpectrumType : SpectrumSettings
- NamesOfType : IonDetector
- namesToIds_ : ControlledVocabulary
- nan_ : SVOutStream
- native_id : CsiFingerIdMzTabWriter::CsiAdapterIdentification , SiriusMzTabWriter::SiriusAdapterIdentification , SpectrumMetaDataLookup::SpectrumMetaData
- native_id_ : ChromatogramSettings , SpectrumSettings , SpectrumSettingsVisualizer
- native_id_accession : SiriusMSFile::AccessionInfo
- native_id_type : SiriusMSFile::AccessionInfo
- native_id_type_ : SourceFile , SourceFileVisualizer
- native_id_type_accession_ : SourceFile
- native_ids : SiriusMSFile::CompoundInfo
- native_spectrum_name_ : PepXMLFile
- nativeid_to_index_ : QCBase::SpectraMap
- near_ : Spectrum3DOpenGLCanvas
- nearest_neighbour_index_ : MinimumDistance
- neg_ : ROCCurve
- neg_adducts_ : AccurateMassSearchEngine
- neg_adducts_fname_ : AccurateMassSearchEngine
- neg_charges_ : Compomer
- negative_mode_ : MetaboliteFeatureDeconvolution
- negative_prior_ : PosteriorErrorProbabilityModel
- neighbors_ : QTCluster
- nesting_level_ : MzXMLHandler
- net_charge_ : Compomer
- network_manager_ : TOPPASBase
- network_reply_ : TOPPASBase
- neutral_loss_average_mass_ : ResidueModification
- neutral_loss_diff_formula_ : UnimodXMLHandler , ResidueModification
- neutral_loss_diff_formulas_ : UnimodXMLHandler
- neutral_loss_mono_mass_ : ResidueModification
- neutral_losses_for_ions_ : SequestInfile
- NEUTRAL_MR : MS2Info
- new_code_ : Ribonucleotide
- new_eluent_ : GradientVisualizer
- new_node : _Alloc_base< _Tp, _Alloc >::NoLeakAlloc
- new_timepoint_ : GradientVisualizer
- newdescription_ : MetaInfoVisualizer
- newkey_ : MetaInfoVisualizer
- newline_ : SVOutStream
- newRowButton_ : ListEditor
- newvalue_ : MetaInfoVisualizer
- next_consumer_ : MSDataAggregatingConsumer
- next_index_ : MetaInfoRegistry
- next_v : IDBoostGraph::dfs_ccsplit_visitor
- nextrow_ : GradientVisualizer , MetaInfoVisualizer
- nilVal : Pattern< TNeedle, FuzzyAC >
- nn_threshold : MRMFeatureSelector::SelectorParameters
- no_exceptions : Summary
- no_id : RNPxlReportRow
- no_masstrace_info_isotope_pattern_ : SiriusAdapterAlgorithm
- no_mzml_ : MzCalibration
- no_precursors : IDMapper::SpectraIdentificationState
- no_recalibration_ : SiriusAdapterAlgorithm
- no_rt_error_ : MascotXMLHandler
- NoCleavage : EnzymaticDigestion
- node_offset_ : TOPPASBase
- nodes : Param::ParamNode
- nodes_ : SimpleSVM
- noise_ : SiriusAdapterAlgorithm
- noise_for_empty_window_ : SignalToNoiseEstimatorMeanIterative< Container > , SignalToNoiseEstimatorMedian< Container >
- noise_level_ : PeakPickerCWT
- noise_threshold_int_ : MassTraceDetection
- noloss_regex_ : SpectrumAnnotator
- nominal_mass_ : IMSIsotopeDistribution
- non_zero_decomposition_coefficients : SIPPeptide
- norm_factor : FeatureDistance::DistanceParams_
- norm_rt_score : OpenSwath_Scores
- normalization_enabled_ : IsobaricQuantifier
- normalize_xcorr_ : SequestInfile
- normalized_experimental_rt : OpenSwath_Scores
- note : TransformationModel::DataPoint
- np_compression : MzMLHandlerHelper::BinaryData , MSNumpressCoder::NumpressConfig
- np_config_fda_ : PeakFileOptions
- np_config_int_ : PeakFileOptions
- np_config_mz_ : PeakFileOptions
- nr_charges_ : DiaPrescore
- nr_isotopes_ : DiaPrescore
- nr_iterations_ : PeakPickerIterative
- nr_ms1_spectra_ : CachedSwathFileConsumer , MzMLSwathFileConsumer , SwathQC
- nr_ms2_spectra_ : CachedSwathFileConsumer , MzMLSwathFileConsumer
- nr_partitions_ : QTClusterFinder
- nr_peaks : OpenSwath_Scores
- nr_windows : SignalToNoiseEstimatorMedianRapid::NoiseEstimator
- NRISOTOPES : MSPeak
- nrIsotopes_ : DeconvPeak
- nrPrefractionationGroups_ : IDBoostGraph
- nt_regex_ : SpectrumAnnotator
- NTerm_loss_formulas_ : Residue
- NTerm_loss_names_ : Residue
- nucleic_acid_data_ : MzTab
- nucleic_acid_search_engine_score : MzTabMetaData
- nucleotide_reading_frame_ : SequestInfile
- null_ : MzTabNullAbleBase
- num_frags_ : SequestOutfile
- num_iso_peaks_mean : OPXLDataStructs::CrossLinkSpectrumMatch
- num_iso_peaks_mean_linear_alpha : OPXLDataStructs::CrossLinkSpectrumMatch
- num_iso_peaks_mean_linear_beta : OPXLDataStructs::CrossLinkSpectrumMatch
- num_iso_peaks_mean_xlinks_alpha : OPXLDataStructs::CrossLinkSpectrumMatch
- num_iso_peaks_mean_xlinks_beta : OPXLDataStructs::CrossLinkSpectrumMatch
- num_maps_ : KDTreeFeatureMaps , QTCluster , QTClusterFinder
- num_ms2_spectra : Ms2IdentificationRate::IdentificationRateData
- num_oligos_distinct_ms_run : MzTabNucleicAcidSectionRow
- num_oligos_unique_ms_run : MzTabNucleicAcidSectionRow
- num_osms_ms_run : MzTabNucleicAcidSectionRow
- NUM_PARAMS_ : EGHTraceFitter , GaussTraceFitter
- num_peptide_identification : Ms2IdentificationRate::IdentificationRateData
- num_peptides_distinct_ms_run : MzTabProteinSectionRow
- num_peptides_unique_ms_run : MzTabProteinSectionRow
- num_psms_ms_run : MzTabProteinSectionRow
- number : FuzzyStringComparator::StreamElement_
- number_ : Sample
- number_intensity_levels : SvmTheoreticalSpectrumGenerator::SvmModelParameterSet
- number_ms2_empty : IsobaricQuantifierStatistics
- number_ms2_total : IsobaricQuantifierStatistics
- number_of_decoy : ProteinResolver::MSDGroup
- number_of_experimental_peptides : ProteinResolver::ProteinEntry
- number_of_max_aa_ : MassDecomposition
- number_of_missed_cleavages_ : XTandemInfile
- number_of_runs_ : ConsensusIDAlgorithm
- number_of_target : ProteinResolver::MSDGroup
- number_of_target_plus_decoy : ProteinResolver::MSDGroup
- number_of_threads_ : XTandemInfile
- number_regions : SvmTheoreticalSpectrumGenerator::SvmModelParameterSet
- number_top_hits_ : OpenPepXLAlgorithm , OpenPepXLLFAlgorithm
- numden_r_ids_ : MzQuantMLHandler
- numerator_ref_ : ConsensusFeature::Ratio
- numpressErrorTolerance : MSNumpressCoder::NumpressConfig
- numpressFixedPoint : MSNumpressCoder::NumpressConfig