| OpenMS 2.5.0

SHFeature Member List

This is the complete list of members for SHFeature, including all inherited members.

_MONO_H | SHFeature | private static
_MONO_O | SHFeature | private static
add_matched_feature(SHFeature *) | SHFeature |
add_MS2_info(MS2Info *) | SHFeature |
add_MS2_info(std::map< double, std::vector< MS2Info > > *) | SHFeature |
addMS2Feature(MS2Feature *in) | SHFeature |
alignment_error_down | SHFeature | private
alignment_error_up | SHFeature | private
apex_peak_intensity | SHFeature | private
BackgroundNoise | SHFeature | private
charge_state | SHFeature |
check_AC(std::string in) | SHFeature |
check_AC(std::string in, double T) | SHFeature |
check_match_by_id(int) | SHFeature |
check_MS2_empty() | SHFeature |
compareFeatureMassValuesAtPPMLevel(double, double) | SHFeature | static
deriveChargeStates(SHFeature *) | SHFeature |
erase_match_list() | SHFeature |
feature_ID | SHFeature |
feature_match_status | SHFeature | private
featureExtraInformation | SHFeature | private
find_match_by_id(int ID) | SHFeature |
get_AC() | SHFeature |
get_AC(double T) | SHFeature |
get_alignment_error_down() | SHFeature |
get_alignment_error_up() | SHFeature |
get_apex_peak_intensity() | SHFeature |
get_best_MS2_SCAN() | SHFeature |
get_best_MS2_SCAN(double) | SHFeature |
get_charge_state() | SHFeature |
get_feature(int) | SHFeature |
get_feature_ID() | SHFeature |
get_feature_match_status() | SHFeature |
get_FEATURE_PI() | SHFeature |
get_feature_profile() | SHFeature |
get_MASTER_ID() | SHFeature |
get_match_list() | SHFeature |
get_match_list_end() | SHFeature |
get_match_list_REFERENCE() | SHFeature |
get_match_list_start() | SHFeature |
get_MATCHED_peak_area() | SHFeature |
get_matching_nb() | SHFeature |
get_MOD_SQ() | SHFeature |
get_MOD_SQ(double T) | SHFeature |
get_Molecular_Mass() | SHFeature |
get_MONO_H() | SHFeature | static
get_MS2_info() | SHFeature |
get_MS2_info(double) | SHFeature |
get_MS2_scan() | SHFeature |
get_MS2_scan(double T) | SHFeature |
get_MS2_SCAN_LIST() | SHFeature |
get_MS2_SCAN_LIST_END() | SHFeature |
get_MS2_SCAN_LIST_START() | SHFeature |
get_MS2_SCAN_MAP() | SHFeature |
get_MS2_SCANS_END() | SHFeature |
get_MS2_SCANS_SIZE() | SHFeature |
get_MS2_SCANS_START() | SHFeature |
get_MS2_TYPE_TAG() | SHFeature |
get_MS2_TYPE_TAG(double T) | SHFeature |
get_MZ() | SHFeature |
get_MZ_END() | SHFeature |
get_MZ_START() | SHFeature |
get_nb_common_match() | SHFeature |
get_peak_area() | SHFeature |
get_peak_area(int) | SHFeature |
get_peak_score() | SHFeature |
get_pep_prob() | SHFeature |
get_pep_prob(double T) | SHFeature |
get_profile_Molecular_Mass() | SHFeature |
get_profile_retention_time() | SHFeature |
get_raw_MZ() | SHFeature |
get_raw_retention_time_apex() | SHFeature |
get_replicate_intensity_sum() | SHFeature |
get_replicate_match_nb() | SHFeature |
get_retention_time() | SHFeature |
get_retention_time_END() | SHFeature |
get_retention_time_START() | SHFeature |
get_scan_end() | SHFeature |
get_scan_number() | SHFeature |
get_scan_start() | SHFeature |
get_SCORE_HOLDER() | SHFeature |
get_spectrum_ID() | SHFeature |
get_SQ() | SHFeature |
get_SQ(double T) | SHFeature |
get_THEO_MZ() | SHFeature |
get_THEO_MZ(double T) | SHFeature |
get_TOTAL_SQ() | SHFeature |
get_TOTAL_SQ(double T) | SHFeature |
getBackgroundNoiseLevel() | SHFeature |
getFeatureExtraInformation() | SHFeature |
getFeatureMassErrorAtPPMLevel(double) | SHFeature | static
getLCelutionProfile() | SHFeature |
getMS2Feature() | SHFeature |
getSignalToNoise() | SHFeature |
LCprofile | SHFeature | private
MASTER_ID | SHFeature | private
matched_feature_list | SHFeature | private
MONO_MZ | SHFeature |
MONO_MZ_END | SHFeature | private
MONO_MZ_ORIGINAL | SHFeature | private
MONO_MZ_START | SHFeature | private
MS2_SCANS | SHFeature | private
MS2TraceFeature | SHFeature | private
normalize_peak_area_by_factor(double factor) | SHFeature |
operator=(const SHFeature &) | SHFeature |
operator==(const SHFeature &) | SHFeature |
PEAK_SCORE | SHFeature | private
PI | SHFeature | private
removeAllMS2Information() | SHFeature |
removeMS2Feature() | SHFeature |
scan_apex | SHFeature | private
scan_end | SHFeature | private
scan_start | SHFeature | private
SCORE_HOLDER | SHFeature | private
set_alignment_error_down(double in) | SHFeature |
set_alignment_error_up(double in) | SHFeature |
set_apex_peak_intensity(double in) | SHFeature |
set_charge_state(int in) | SHFeature |
set_feature_ID(int in) | SHFeature |
set_feature_match_status(bool in) | SHFeature |
set_FEATURE_PI(double in) | SHFeature |
set_MASTER_ID(int in) | SHFeature |
set_MZ(double in) | SHFeature |
set_MZ_END(double in) | SHFeature |
set_MZ_START(double in) | SHFeature |
set_peak_area(float in) | SHFeature |
set_peak_score(double in) | SHFeature |
set_raw_MZ(double in) | SHFeature |
set_raw_retention_time_apex(double in) | SHFeature |
set_retention_time(double in) | SHFeature |
set_retention_time_END(double in) | SHFeature |
set_retention_time_START(double in) | SHFeature |
set_scan_end(int in) | SHFeature |
set_scan_number(int in) | SHFeature |
set_scan_start(int in) | SHFeature |
set_SCORE_HOLDER(double in) | SHFeature |
set_spectrum_ID(int in) | SHFeature |
setBackgroundNoiseLevel(double in) | SHFeature |
setFeatureExtraInformation(std::string in) | SHFeature |
setLCelutionProfile(FeatureLCProfile *in) | SHFeature |
setSignalToNoise(double in) | SHFeature |
SHFeature(const SHFeature &) | SHFeature |
SHFeature(const SHFeature *) | SHFeature |
SHFeature(double, double, int, int, int, int, float, float, float) | SHFeature |
SHFeature(float, int, int) | SHFeature |
SHFeature(MS2Feature *) | SHFeature |
SHFeature() | SHFeature |
show_info() | SHFeature |
showMS2consensSpectraInfo() | SHFeature |
SignalToNoise | SHFeature | private
spectrum_ID | SHFeature | private
total_peak_area | SHFeature | private
TR | SHFeature |
TR_APEX | SHFeature | private
TR_END | SHFeature |
TR_START | SHFeature |
~SHFeature() | SHFeature |