| OpenMS 2.5.0

### - a -

- AcquisitionMode : IonDetector
- ActionMode : XMLHandler , TOPPASScene
- ActionModes : SpectrumCanvas
- ActivationMethod : Precursor
- AggregationMethod : BasicProteinInferenceAlgorithm
- Alignment : AxisPainter
- AnalyzerType : MassAnalyzer
- AnnotationState : BaseFeature
- Averagines : ExtendedIsotopeModel , IsotopeModel

### - b -

- BoundaryCondition : BSpline2d
- ByteOrder : Base64

### - c -

- CASE : ListUtils
- CHARGEMODE : FeatureDeconvolution , MetaboliteFeatureDeconvolution
- ChecksumType : SourceFile
- ChromatogramType : ChromatogramSettings
- CombinationsLogic : CVMappingRule
- CopyOptions : File

### - d -

- DataType : DataValue , LayerData
- DecoyTransitionType : ReactionMonitoringTransition
- DFS_COLOR : TOPPASVertex
- DimensionDescription : Peak2D
- DRangeIntersection : DRange< D >
- DrawModes : Spectrum1DCanvas
- DriftTimeUnit : Precursor

### - e -

- EdgeStatus : TOPPASEdge
- ErrorUnit : XTandemInfile
- ExitCodes : OpenPepXLAlgorithm , OpenPepXLLFAlgorithm , PeptideIndexing , SimpleSearchEngineAlgorithm , TOPPBase , XFDRAlgorithm

### - f -

- FilterOperation : DataFilters
- FilterType : DataFilters
- Flag : FeatureFinderDefs
- Flags : LayerData
- FLOATINDICES : PeakPickerMRM
- FragmentationType : ProtonDistributionModel

### - g -

- GroupType : XTandemXMLFile

### - i -

- InletType : IonSource
- IntensityModes : SpectrumCanvas
- IntensityThresholdCalculation : SignalToNoiseEstimatorMeanIterative< Container > , SignalToNoiseEstimatorMedian< Container >
- InterpolationMode : MultiGradient
- IonizationMethod : IonSource
- IONIZATIONMETHOD : RawMSSignalSimulation
- IonizationType : IonizationSimulation
- IonOpticsType : Instrument
- IOType : TOPPASToolVertex::IOInfo
- IsotopeType : CompNovoIonScoringBase
- IsotopeVariant : Tagging
- ITRAQ_TYPES : ItraqConstants

### - l -

- LabelMode : Spectrum1DCanvas
- LabelType : LayerData
- LambdaScore : MRMFeatureSelector
- LOADDETAIL : XMLHandler
- LogState : TOPPASBase , TOPPViewBase
- LogType : ProgressLogger

### - m -

- MassType : XTandemInfile
- Measure : IDMapper
- MODELTYPE : MZTrafoModel
- MT_QUANTMETHOD : MassTrace

### - n -

- NASFragmentType : NASequence
- NormalizationMethod : ConsensusMapNormalizerAlgorithmMedian
- NumpressCompression : MSNumpressCoder

### - p -

- ParameterTypes : ParameterInformation
- PeakMassType : ProteinIdentification
- PeptidePosition : OPXLDataStructs
- Polarity : IonSource
- ProcessingAction : DataProcessing
- PROFILESHAPE : RawMSSignalSimulation
- ProteinProteinCrossLinkType : OPXLDataStructs

### - q -

- QUANT_TYPES : MSQuantifications
- QuotingMethod : String

### - r -

- ReflectronState : MassAnalyzer
- RefreshStatus : TOPPASScene
- RequirementLevel : CVMappingRule
- Requires : QCBase
- ResidueType : Residue
- ResolutionMethod : MassAnalyzer
- RESOLUTIONMODEL : RawMSSignalSimulation
- ResolutionType : MassAnalyzer
- RETURN_STATUS : NonNegativeLeastSquaresSolver
- RTType : RetentionTime
- RTUnit : RetentionTime

### - s -

- SampleState : Sample
- ScanDirection : MassAnalyzer
- ScanLaw : MassAnalyzer
- ScanMode : InstrumentSettings
- ScoreType : PercolatorOutfile
- Sense : LPWrapper
- ShadeModes : Spectrum3DCanvas
- SIDE : Compomer
- SOLVER : LPWrapper
- SolverStatus : LPWrapper
- Sorted : IsotopeDistribution
- SourceClassification : ResidueModification
- Specificity : EnzymaticDigestion
- SpecificityType : Modification
- SpectrumType : SpectrumSettings
- StreamType : StreamHandler
- SUBSTREESTATUS : TOPPASVertex
- SVM_kernel_type : SVMWrapper
- SVM_parameter_type : SVMWrapper

### - t -

- TermSpecificity : ResidueModification
- TermSpecificityNuc : Ribonucleotide
- ToleranceUnit : FragmentMassError
- TOOLSTATUS : TOPPASToolVertex
- Type : FileTypes , IonDetector , ListEditor , LPWrapper , PeakShape , PrecursorIonSelection
- type : ProteinResolver::ProteinEntry , ProteinResolver::ResolverResult

### - u -

- UnitType : DataValue

### - v -

- VariableType : LPWrapper , MRMFeatureSelector

### - w -

- WEIGHTMODE : WeightWrapper
- WriteFormat : LPWrapper

### - x -

- XRefType : ControlledVocabulary::CVTerm