| OpenMS 2.5.0

ResidueModification Member List

This is the complete list of members for ResidueModification, including all inherited members.

AA_SUBSTITUTION enum value | ResidueModification |
addSynonym(const String &synonym) | ResidueModification |
ANYWHERE enum value | ResidueModification |
ARTIFACT enum value | ResidueModification |
average_mass_ | ResidueModification | protected
C_TERM enum value | ResidueModification |
CHEMICAL_DERIVATIVE enum value | ResidueModification |
classification_ | ResidueModification | protected
COTRANSLATIONAL enum value | ResidueModification |
diff_average_mass_ | ResidueModification | protected
diff_formula_ | ResidueModification | protected
diff_mono_mass_ | ResidueModification | protected
formula_ | ResidueModification | protected
full_id_ | ResidueModification | protected
full_name_ | ResidueModification | protected
getAverageMass() const | ResidueModification |
getDiffAverageMass() const | ResidueModification |
getDiffFormula() const | ResidueModification |
getDiffMonoMass() const | ResidueModification |
getFormula() const | ResidueModification |
getFullId() const | ResidueModification |
getFullName() const | ResidueModification |
getId() const | ResidueModification |
getMonoMass() const | ResidueModification |
getName() const | ResidueModification |
getNeutralLossAverageMass() const | ResidueModification |
getNeutralLossDiffFormula() const | ResidueModification |
getNeutralLossMonoMass() const | ResidueModification |
getOrigin() const | ResidueModification |
getPSIMODAccession() const | ResidueModification |
getSourceClassification() const | ResidueModification |
getSourceClassificationName(SourceClassification classification=NUMBER_OF_SOURCE_CLASSIFICATIONS) const | ResidueModification |
getSynonyms() const | ResidueModification |
getTermSpecificity() const | ResidueModification |
getTermSpecificityName(TermSpecificity term_spec=NUMBER_OF_TERM_SPECIFICITY) const | ResidueModification |
getUniModAccession() const | ResidueModification |
getUniModRecordId() const | ResidueModification |
hasNeutralLoss() const | ResidueModification |
HYPOTHETICAL enum value | ResidueModification |
id_ | ResidueModification | protected
ISOTOPIC_LABEL enum value | ResidueModification |
isUserDefined() const | ResidueModification |
mono_mass_ | ResidueModification | protected
MULTIPLE enum value | ResidueModification |
N_TERM enum value | ResidueModification |
name_ | ResidueModification | protected
NATURAL enum value | ResidueModification |
neutral_loss_average_mass_ | ResidueModification | protected
neutral_loss_diff_formula_ | ResidueModification | protected
neutral_loss_mono_mass_ | ResidueModification | protected
NLINKED_GLYCOSYLATION enum value | ResidueModification |
NONSTANDARD_RESIDUE enum value | ResidueModification |
NUMBER_OF_SOURCE_CLASSIFICATIONS enum value | ResidueModification |
NUMBER_OF_TERM_SPECIFICITY enum value | ResidueModification |
OLINKED_GLYCOSYLATION enum value | ResidueModification |
operator!=(const ResidueModification &modification) const | ResidueModification |
operator<(const ResidueModification &modification) const | ResidueModification |
operator=(const ResidueModification &)=default | ResidueModification |
operator=(ResidueModification &&) &=default | ResidueModification |
operator==(const ResidueModification &modification) const | ResidueModification |
origin_ | ResidueModification | protected
OTHER enum value | ResidueModification |
OTHER_GLYCOSYLATION enum value | ResidueModification |
POSTTRANSLATIONAL enum value | ResidueModification |
PRETRANSLATIONAL enum value | ResidueModification |
PROTEIN_C_TERM enum value | ResidueModification |
PROTEIN_N_TERM enum value | ResidueModification |
psi_mod_accession_ | ResidueModification | protected
ResidueModification() | ResidueModification |
ResidueModification(const ResidueModification &)=default | ResidueModification |
ResidueModification(ResidueModification &&)=default | ResidueModification |
setAverageMass(double mass) | ResidueModification |
setDiffAverageMass(double mass) | ResidueModification |
setDiffFormula(const EmpiricalFormula &diff_formula) | ResidueModification |
setDiffMonoMass(double mass) | ResidueModification |
setFormula(const String &composition) | ResidueModification |
setFullId(const String &full_id="") | ResidueModification |
setFullName(const String &full_name) | ResidueModification |
setId(const String &id) | ResidueModification |
setMonoMass(double mass) | ResidueModification |
setName(const String &name) | ResidueModification |
setNeutralLossAverageMass(double average_mass) | ResidueModification |
setNeutralLossDiffFormula(const EmpiricalFormula &loss) | ResidueModification |
setNeutralLossMonoMass(double mono_mass) | ResidueModification |
setOrigin(char origin) | ResidueModification |
setPSIMODAccession(const String &id) | ResidueModification |
setSourceClassification(const String &classification) | ResidueModification |
setSourceClassification(SourceClassification classification) | ResidueModification |
setSynonyms(const std::set< String > &synonyms) | ResidueModification |
setTermSpecificity(TermSpecificity term_spec) | ResidueModification |
setTermSpecificity(const String &name) | ResidueModification |
setUniModRecordId(const Int &id) | ResidueModification |
SourceClassification enum name | ResidueModification |
synonyms_ | ResidueModification | protected
term_spec_ | ResidueModification | protected
TermSpecificity enum name | ResidueModification |
unimod_record_id_ | ResidueModification | protected
UNKNOWN enum value | ResidueModification |
~ResidueModification() | ResidueModification | virtual