| OpenMS 2.5.0

MRMFragmentSelection.h
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2 // OpenMS -- Open-Source Mass Spectrometry
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4 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
5 // ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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30 // --------------------------------------------------------------------------
31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Andreas Bertsch $
33 // --------------------------------------------------------------------------
34
35 #pragma once
36
37 #include <OpenMS/DATASTRUCTURES/DefaultParamHandler.h>
38 #include <OpenMS/KERNEL/StandardTypes.h>
39
40 #include <vector>
41
42 namespace OpenMS
43 {
58 class OPENMS_DLLAPI MRMFragmentSelection :
59 public DefaultParamHandler
60 {
61
62 public:
63
67 MRMFragmentSelection();
69
71 MRMFragmentSelection(const MRMFragmentSelection & rhs);
72
74 ~MRMFragmentSelection() override;
76
78 MRMFragmentSelection & operator=(const MRMFragmentSelection & rhs);
79
81 void selectFragments(std::vector<Peak1D> & selected_peaks, const PeakSpectrum & spec);
82
83 protected:
84
86 bool peakselectionIsAllowed_(const String& name, const int charge);
87 };
88 }
89
OpenMS::String
A more convenient string class.
Definition: String.h:58
OpenMS::DefaultParamHandler
A base class for all classes handling default parameters.
Definition: DefaultParamHandler.h:91
OpenMS::MRMFragmentSelection
This class can select appropriate fragment ions of an MS/MS spectrum of a peptide.
Definition: MRMFragmentSelection.h:58
StandardTypes.h
OpenMS::MSSpectrum
The representation of a 1D spectrum.
Definition: MSSpectrum.h:67
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
DefaultParamHandler.h