| OpenMS 2.5.0

CompNovoIonScoringBase Member List

This is the complete list of members for CompNovoIonScoringBase, including all inherited members.

addSingleChargedIons_(Map< double, IonScore > &ion_scores, PeakSpectrum &CID_spec) | CompNovoIonScoringBase | protected
check_defaults_ | DefaultParamHandler | protected
CHILD enum value | CompNovoIonScoringBase |
classifyIsotopes_(const PeakSpectrum &spec, PeakSpectrum::ConstIterator it) | CompNovoIonScoringBase | protected
CompNovoIonScoringBase() | CompNovoIonScoringBase |
CompNovoIonScoringBase(const CompNovoIonScoringBase &source) | CompNovoIonScoringBase |
DefaultParamHandler(const String &name) | DefaultParamHandler |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |
defaults_ | DefaultParamHandler | protected
defaultsToParam_() | DefaultParamHandler | protected
error_name_ | DefaultParamHandler | protected
fragment_mass_tolerance_ | CompNovoIonScoringBase | protected
getDefaults() const | DefaultParamHandler |
getName() const | DefaultParamHandler |
getParameters() const | DefaultParamHandler |
getSubsections() const | DefaultParamHandler |
initIsotopeDistributions_() | CompNovoIonScoringBase | protected
isotope_distributions_ | CompNovoIonScoringBase | protected
IsotopeType enum name | CompNovoIonScoringBase |
LONE enum value | CompNovoIonScoringBase |
operator=(const CompNovoIonScoringBase &source) | CompNovoIonScoringBase |
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual
param_ | DefaultParamHandler | protected
PARENT enum value | CompNovoIonScoringBase |
scoreIsotopes(const PeakSpectrum &CID_spec, PeakSpectrum::ConstIterator it, Size charge) | CompNovoIonScoringBase |
scoreIsotopes_(const PeakSpectrum &spec, PeakSpectrum::ConstIterator it, Map< double, IonScore > &CID_nodes, Size charge=1) | CompNovoIonScoringBase | protected
scoreWitnessSet_(Size charge, double precursor_weight, Map< double, IonScore > &CID_nodes, const PeakSpectrum &CID_orig_spec)=0 | CompNovoIonScoringBase | protected pure virtual
setName(const String &name) | DefaultParamHandler |
setParameters(const Param &param) | DefaultParamHandler |
subsections_ | DefaultParamHandler | protected
updateMembers_() override | CompNovoIonScoringBase | protected virtual
warn_empty_defaults_ | DefaultParamHandler | protected
~CompNovoIonScoringBase() override | CompNovoIonScoringBase |
~DefaultParamHandler() | DefaultParamHandler | virtual