| OpenMS 2.5.0

PoseClusteringAffineSuperimposer.h
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2 // OpenMS -- Open-Source Mass Spectrometry
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5 // ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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30 // --------------------------------------------------------------------------
31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Eva Lange, Clemens Groepl $
33 // --------------------------------------------------------------------------
34
35
36 #pragma once
37
38 #include <OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h>
39 #include <OpenMS/KERNEL/ConsensusMap.h>
40 #include <OpenMS/KERNEL/Peak2D.h>
41
42 namespace OpenMS
43 {
44
66 class OPENMS_DLLAPI PoseClusteringAffineSuperimposer :
67 public BaseSuperimposer
68 {
69 public:
70
72 PoseClusteringAffineSuperimposer();
73
75
76 ~PoseClusteringAffineSuperimposer() override
77 {}
78
98 void run(const ConsensusMap & map_model, const ConsensusMap & map_scene, TransformationDescription & transformation) override;
99
101 virtual void run(const std::vector<Peak2D> & map_model, const std::vector<Peak2D> & map_scene, TransformationDescription & transformation);
102
104 static BaseSuperimposer * create()
105 {
106 return new PoseClusteringAffineSuperimposer();
107 }
108
110 static const String getProductName()
111 {
112 return "poseclustering_affine";
113 }
114
115 };
116 } // namespace OpenMS
117
OpenMS::String
A more convenient string class.
Definition: String.h:58
OpenMS::PoseClusteringAffineSuperimposer
A superimposer that uses a voting scheme, also known as pose clustering, to find a good affine transf...
Definition: PoseClusteringAffineSuperimposer.h:66
ConsensusMap.h
OpenMS::TransformationDescription
Generic description of a coordinate transformation.
Definition: TransformationDescription.h:61
OpenMS::BaseSuperimposer
The base class of all superimposer algorithms.
Definition: BaseSuperimposer.h:56
OpenMS::PoseClusteringAffineSuperimposer::getProductName
static const String getProductName()
Returns the name of this module.
Definition: PoseClusteringAffineSuperimposer.h:110
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
Peak2D.h
OpenMS::PoseClusteringAffineSuperimposer::create
static BaseSuperimposer * create()
Returns an instance of this class.
Definition: PoseClusteringAffineSuperimposer.h:104
OpenMS::ConsensusMap
A container for consensus elements.
Definition: ConsensusMap.h:79
OpenMS::PoseClusteringAffineSuperimposer::~PoseClusteringAffineSuperimposer
~PoseClusteringAffineSuperimposer() override
Destructor.
Definition: PoseClusteringAffineSuperimposer.h:76
BaseSuperimposer.h