| OpenMS 2.5.0

ConsensusFeature Member List

This is the complete list of members for ConsensusFeature, including all inherited members.

addRatio(const Ratio &r) | ConsensusFeature |
AnnotationState enum name | BaseFeature |
BaseFeature() | BaseFeature |
BaseFeature(const BaseFeature &feature)=default | BaseFeature |
BaseFeature(BaseFeature &&feature)=default | BaseFeature |
BaseFeature(const BaseFeature &rhs, UInt64 map_index) | BaseFeature |
BaseFeature(const Peak2D &point) | BaseFeature | explicit
BaseFeature(const RichPeak2D &point) | BaseFeature | explicit
begin() const | ConsensusFeature |
begin() | ConsensusFeature |
charge_ | BaseFeature | protected
ChargeType typedef | BaseFeature |
clear() | ConsensusFeature |
clearMetaInfo() | MetaInfoInterface |
clearUniqueId() | UniqueIdInterface | inline
computeConsensus() | ConsensusFeature |
computeDechargeConsensus(const FeatureMap &fm, bool intensity_weighted_averaging=false) | ConsensusFeature |
computeMonoisotopicConsensus() | ConsensusFeature |
ConsensusFeature() | ConsensusFeature |
ConsensusFeature(const ConsensusFeature &rhs)=default | ConsensusFeature |
ConsensusFeature(ConsensusFeature &&rhs)=default | ConsensusFeature |
ConsensusFeature(const BaseFeature &feature) | ConsensusFeature | explicit
ConsensusFeature(UInt64 map_index, const Peak2D &element, UInt64 element_index) | ConsensusFeature |
ConsensusFeature(UInt64 map_index, const BaseFeature &element) | ConsensusFeature |
const_iterator typedef | ConsensusFeature |
const_reverse_iterator typedef | ConsensusFeature |
CoordinateType typedef | Peak2D |
createIfNotExists_() | MetaInfoInterface | inline protected
DIMENSION enum value | Peak2D |
dimension_name_full_ | Peak2D | protected static
dimension_name_short_ | Peak2D | protected static
dimension_unit_full_ | Peak2D | protected static
dimension_unit_short_ | Peak2D | protected static
DimensionDescription enum name | Peak2D |
empty() const | ConsensusFeature |
end() const | ConsensusFeature |
end() | ConsensusFeature |
ensureUniqueId() | UniqueIdInterface | inline
FEATURE_ID_MULTIPLE_DIVERGENT enum value | BaseFeature |
FEATURE_ID_MULTIPLE_SAME enum value | BaseFeature |
FEATURE_ID_NONE enum value | BaseFeature |
FEATURE_ID_SINGLE enum value | BaseFeature |
fullDimensionName(UInt const dim) | Peak2D | static
fullDimensionNameMZ() | Peak2D | static
fullDimensionNameRT() | Peak2D | static
fullDimensionUnit(UInt const dim) | Peak2D | static
fullDimensionUnitMZ() | Peak2D | static
fullDimensionUnitRT() | Peak2D | static
getAnnotationState() const | BaseFeature |
getCharge() const | BaseFeature |
getFeatureList() const | ConsensusFeature |
getFeatures() const | ConsensusFeature |
getIntensity() const | Peak2D | inline
getIntensityRange() const | ConsensusFeature |
getKeys(std::vector< String > &keys) const | MetaInfoInterface |
getKeys(std::vector< UInt > &keys) const | MetaInfoInterface |
getMetaValue(const String &name, const DataValue &default_value=DataValue::EMPTY) const | MetaInfoInterface |
getMetaValue(UInt index, const DataValue &default_value=DataValue::EMPTY) const | MetaInfoInterface |
getMZ() const | Peak2D | inline
getPeptideIdentifications() const | BaseFeature |
getPeptideIdentifications() | BaseFeature |
getPosition() const | Peak2D | inline
getPosition() | Peak2D | inline
getPositionRange() const | ConsensusFeature |
getQuality() const | BaseFeature |
getRatios() const | ConsensusFeature |
getRatios() | ConsensusFeature |
getRT() const | Peak2D | inline
getUniqueId() const | UniqueIdInterface | inline
getWidth() const | BaseFeature |
handles_ | ConsensusFeature | private
HandleSetType typedef | ConsensusFeature |
hasInvalidUniqueId() const | UniqueIdInterface | inline
hasValidUniqueId() const | UniqueIdInterface | inline
insert(const ConsensusFeature &cf) | ConsensusFeature |
insert(const FeatureHandle &handle) | ConsensusFeature |
insert(const HandleSetType &handle_set) | ConsensusFeature |
insert(UInt64 map_index, const Peak2D &element, UInt64 element_index) | ConsensusFeature |
insert(UInt64 map_index, const BaseFeature &element) | ConsensusFeature |
intensity_ | Peak2D | protected
IntensityType typedef | Peak2D |
INVALID enum value | UniqueIdInterface |
isMetaEmpty() const | MetaInfoInterface |
isValid(UInt64 unique_id) | UniqueIdInterface | inline static
iterator typedef | ConsensusFeature |
meta_ | MetaInfoInterface | protected
MetaInfoInterface() | MetaInfoInterface |
MetaInfoInterface(const MetaInfoInterface &rhs) | MetaInfoInterface |
MetaInfoInterface(MetaInfoInterface &&) noexcept | MetaInfoInterface |
metaRegistry() | MetaInfoInterface | static
metaValueExists(const String &name) const | MetaInfoInterface |
metaValueExists(UInt index) const | MetaInfoInterface |
MZ enum value | Peak2D |
NamesOfAnnotationState | BaseFeature | static
operator!=(const BaseFeature &rhs) const | BaseFeature |
OpenMS::RichPeak2D::operator!=(const RichPeak2D &rhs) const | RichPeak2D | inline
OpenMS::Peak2D::operator!=(const Peak2D &rhs) const | Peak2D | inline
OpenMS::MetaInfoInterface::operator!=(const MetaInfoInterface &rhs) const | MetaInfoInterface |
operator=(const ConsensusFeature &rhs)=default | ConsensusFeature |
operator=(ConsensusFeature &&rhs)=default | ConsensusFeature |
OpenMS::BaseFeature::operator=(const BaseFeature &rhs)=default | BaseFeature |
OpenMS::BaseFeature::operator=(BaseFeature &&rhs) &=default | BaseFeature |
OpenMS::RichPeak2D::operator=(const RichPeak2D &rhs)=default | RichPeak2D |
OpenMS::RichPeak2D::operator=(RichPeak2D &&rhs) &=default | RichPeak2D |
OpenMS::RichPeak2D::operator=(const Peak2D &rhs) | RichPeak2D | inline
OpenMS::Peak2D::operator=(Peak2D &&) &=default | Peak2D |
OpenMS::MetaInfoInterface::operator=(const MetaInfoInterface &rhs) | MetaInfoInterface |
OpenMS::MetaInfoInterface::operator=(MetaInfoInterface &&) noexcept | MetaInfoInterface |
OpenMS::UniqueIdInterface::operator=(UniqueIdInterface const &rhs)=default | UniqueIdInterface |
OpenMS::UniqueIdInterface::operator=(UniqueIdInterface &&) &=default | UniqueIdInterface |
operator==(const BaseFeature &rhs) const | BaseFeature |
OpenMS::RichPeak2D::operator==(const RichPeak2D &rhs) const | RichPeak2D | inline
OpenMS::Peak2D::operator==(const Peak2D &rhs) const | Peak2D | inline
OpenMS::MetaInfoInterface::operator==(const MetaInfoInterface &rhs) const | MetaInfoInterface |
OpenMS::UniqueIdInterface::operator==(UniqueIdInterface const &rhs) const | UniqueIdInterface | inline
Peak2D() | Peak2D | inline
Peak2D(const PositionType &pos, const IntensityType in) | Peak2D | inline explicit
Peak2D(const Peak2D &p)=default | Peak2D |
Peak2D(Peak2D &&)=default | Peak2D |
peptides_ | BaseFeature | protected
position_ | Peak2D | protected
PositionType typedef | Peak2D |
quality_ | BaseFeature | protected
QualityType typedef | BaseFeature |
ratios_ | ConsensusFeature | private
rbegin() const | ConsensusFeature |
rbegin() | ConsensusFeature |
removeMetaValue(const String &name) | MetaInfoInterface |
removeMetaValue(UInt index) | MetaInfoInterface |
rend() const | ConsensusFeature |
rend() | ConsensusFeature |
reverse_iterator typedef | ConsensusFeature |
RichPeak2D() | RichPeak2D | inline
RichPeak2D(const RichPeak2D &p)=default | RichPeak2D |
RichPeak2D(const Peak2D &p) | RichPeak2D | inline explicit
RichPeak2D(const PositionType &pos, const IntensityType in) | RichPeak2D | inline explicit
RichPeak2D(RichPeak2D &&p)=default | RichPeak2D |
RT enum value | Peak2D |
setCharge(const ChargeType &ch) | BaseFeature |
setFeatures(HandleSetType h) | ConsensusFeature |
setIntensity(IntensityType intensity) | Peak2D | inline
setMetaValue(const String &name, const DataValue &value) | MetaInfoInterface |
setMetaValue(UInt index, const DataValue &value) | MetaInfoInterface |
setMZ(CoordinateType coordinate) | Peak2D | inline
setPeptideIdentifications(const std::vector< PeptideIdentification > &peptides) | BaseFeature |
setPosition(const PositionType &position) | Peak2D | inline
setQuality(QualityType q) | BaseFeature |
setRatios(std::vector< Ratio > &rs) | ConsensusFeature |
setRT(CoordinateType coordinate) | Peak2D | inline
setUniqueId() | UniqueIdInterface | inline
setUniqueId(UInt64 rhs) | UniqueIdInterface | inline
setUniqueId(const String &rhs) | UniqueIdInterface |
setWidth(WidthType fwhm) | BaseFeature |
shortDimensionName(UInt const dim) | Peak2D | static
shortDimensionNameMZ() | Peak2D | static
shortDimensionNameRT() | Peak2D | static
shortDimensionUnit(UInt const dim) | Peak2D | static
shortDimensionUnitMZ() | Peak2D | static
shortDimensionUnitRT() | Peak2D | static
size() const | ConsensusFeature |
SIZE_OF_ANNOTATIONSTATE enum value | BaseFeature |
swap(UniqueIdInterface &from) | UniqueIdInterface | inline
unique_id_ | UniqueIdInterface | protected
UniqueIdInterface() | UniqueIdInterface | inline
UniqueIdInterface(const UniqueIdInterface &rhs)=default | UniqueIdInterface |
UniqueIdInterface(UniqueIdInterface &&rhs)=default | UniqueIdInterface |
width_ | BaseFeature | protected
WidthType typedef | BaseFeature |
~BaseFeature() override | BaseFeature |
~ConsensusFeature() override | ConsensusFeature |
~MetaInfoInterface() | MetaInfoInterface |
~Peak2D() | Peak2D | inline
~RichPeak2D() override | RichPeak2D | inline
~UniqueIdInterface()=default | UniqueIdInterface | virtual