| OpenMS 2.5.0

MascotGenericFile Member List

This is the complete list of members for MascotGenericFile, including all inherited members.

check_defaults_ | DefaultParamHandler | protected
CMD enum value | ProgressLogger |
current_logger_ | ProgressLogger | mutable protected
DefaultParamHandler(const String &name) | DefaultParamHandler |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |
defaults_ | DefaultParamHandler | protected
defaultsToParam_() | DefaultParamHandler | protected
endProgress() const | ProgressLogger |
error_name_ | DefaultParamHandler | protected
getDefaults() const | DefaultParamHandler |
getHTTPPeakListEnclosure(const String &filename) const | MascotGenericFile |
getLogType() const | ProgressLogger |
getName() const | DefaultParamHandler |
getNextSpectrum_(std::ifstream &is, SpectrumType &spectrum, Size &line_number, const Size &spectrum_number) | MascotGenericFile | inline protected
getParameters() const | DefaultParamHandler |
getSubsections() const | DefaultParamHandler |
GUI enum value | ProgressLogger |
last_invoke_ | ProgressLogger | mutable protected
load(const String &filename, MapType &exp) | MascotGenericFile | inline
LogType enum name | ProgressLogger |
logTypeToFactoryName_(LogType type) | ProgressLogger | protected static
MascotGenericFile() | MascotGenericFile |
mod_group_map_ | MascotGenericFile | protected
nextProgress() const | ProgressLogger |
NONE enum value | ProgressLogger |
OpenMS::operator=(const ProgressLogger &other) | ProgressLogger |
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual
param_ | DefaultParamHandler | protected
ProgressLogger() | ProgressLogger |
ProgressLogger(const ProgressLogger &other) | ProgressLogger |
recursion_depth_ | ProgressLogger | protected static
setLogType(LogType type) const | ProgressLogger |
setName(const String &name) | DefaultParamHandler |
setParameters(const Param &param) | DefaultParamHandler |
setProgress(SignedSize value) const | ProgressLogger |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger |
store(const String &filename, const PeakMap &experiment, bool compact=false) | MascotGenericFile |
store(std::ostream &os, const String &filename, const PeakMap &experiment, bool compact=false) | MascotGenericFile |
store_compact_ | MascotGenericFile | protected
subsections_ | DefaultParamHandler | protected
type_ | ProgressLogger | mutable protected
updateMembers_() override | MascotGenericFile | virtual
warn_empty_defaults_ | DefaultParamHandler | protected
writeHeader_(std::ostream &os) | MascotGenericFile | protected
writeModifications_(const std::vector< String > &mods, std::ostream &os, bool variable_mods=false) | MascotGenericFile | protected
writeMSExperiment_(std::ostream &os, const String &filename, const PeakMap &experiment) | MascotGenericFile | protected
writeParameterHeader_(const String &name, std::ostream &os) | MascotGenericFile | protected
writeSpectrum_(std::ostream &os, const PeakSpectrum &spec, const String &filename, const String &native_id_type_accession) | MascotGenericFile | protected
~DefaultParamHandler() | DefaultParamHandler | virtual
~MascotGenericFile() override | MascotGenericFile |
~ProgressLogger() | ProgressLogger |