| OpenMS 2.5.0

DigestionEnzymeProtein Member List

This is the complete list of members for DigestionEnzymeProtein, including all inherited members.

addSynonym(const String &synonym) | DigestionEnzyme |
c_term_gain_ | DigestionEnzymeProtein | protected
cleavage_regex_ | DigestionEnzyme | protected
comet_id_ | DigestionEnzymeProtein | protected
crux_id_ | DigestionEnzymeProtein | protected
DigestionEnzyme(const DigestionEnzyme &)=default | DigestionEnzyme |
DigestionEnzyme(DigestionEnzyme &&)=default | DigestionEnzyme |
DigestionEnzyme(const String &name, const String &cleavage_regex, const std::set< String > &synonyms=std::set< String >(), String regex_description="") | DigestionEnzyme | explicit
DigestionEnzyme() | DigestionEnzyme | protected
DigestionEnzymeProtein() | DigestionEnzymeProtein |
DigestionEnzymeProtein(const DigestionEnzymeProtein &)=default | DigestionEnzymeProtein |
DigestionEnzymeProtein(DigestionEnzymeProtein &&)=default | DigestionEnzymeProtein |
DigestionEnzymeProtein(const String &name, const String &cleavage_regex, const std::set< String > &synonyms=std::set< String >(), String regex_description="", EmpiricalFormula n_term_gain=EmpiricalFormula("H"), EmpiricalFormula c_term_gain=EmpiricalFormula("OH"), String psi_id="", String xtandem_id="", Int comet_id=-1, String crux_id="", Int msgf_id=-1, Int omssa_id=-1) | DigestionEnzymeProtein | explicit
getCometID() const | DigestionEnzymeProtein |
getCruxID() const | DigestionEnzymeProtein |
getCTermGain() const | DigestionEnzymeProtein |
getMSGFID() const | DigestionEnzymeProtein |
getName() const | DigestionEnzyme |
getNTermGain() const | DigestionEnzymeProtein |
getOMSSAID() const | DigestionEnzymeProtein |
getPSIID() const | DigestionEnzymeProtein |
getRegEx() const | DigestionEnzyme |
getRegExDescription() const | DigestionEnzyme |
getSynonyms() const | DigestionEnzyme |
getXTandemID() const | DigestionEnzymeProtein |
msgf_id_ | DigestionEnzymeProtein | protected
n_term_gain_ | DigestionEnzymeProtein | protected
name_ | DigestionEnzyme | protected
omssa_id_ | DigestionEnzymeProtein | protected
operator!=(const DigestionEnzymeProtein &enzyme) const | DigestionEnzymeProtein |
operator!=(const String &cleavage_regex) const | DigestionEnzymeProtein |
OpenMS::DigestionEnzyme::operator!=(const DigestionEnzyme &enzyme) const | DigestionEnzyme |
operator<(const DigestionEnzymeProtein &enzyme) const | DigestionEnzymeProtein |
OpenMS::DigestionEnzyme::operator<(const DigestionEnzyme &enzyme) const | DigestionEnzyme |
operator<<(std::ostream &os, const DigestionEnzymeProtein &enzyme) | DigestionEnzymeProtein | friend
operator=(const DigestionEnzymeProtein &)=default | DigestionEnzymeProtein |
operator=(DigestionEnzymeProtein &&) &=default | DigestionEnzymeProtein |
OpenMS::DigestionEnzyme::operator=(const DigestionEnzyme &)=default | DigestionEnzyme |
OpenMS::DigestionEnzyme::operator=(DigestionEnzyme &&) &=default | DigestionEnzyme |
operator==(const DigestionEnzymeProtein &enzyme) const | DigestionEnzymeProtein |
operator==(const String &cleavage_regex) const | DigestionEnzymeProtein |
OpenMS::DigestionEnzyme::operator==(const DigestionEnzyme &enzyme) const | DigestionEnzyme |
psi_id_ | DigestionEnzymeProtein | protected
regex_description_ | DigestionEnzyme | protected
setCometID(Int value) | DigestionEnzymeProtein |
setCruxID(const String &value) | DigestionEnzymeProtein |
setCTermGain(const EmpiricalFormula &value) | DigestionEnzymeProtein |
setMSGFID(Int value) | DigestionEnzymeProtein |
setName(const String &name) | DigestionEnzyme |
setNTermGain(const EmpiricalFormula &value) | DigestionEnzymeProtein |
setOMSSAID(Int value) | DigestionEnzymeProtein |
setPSIID(const String &value) | DigestionEnzymeProtein |
setRegEx(const String &cleavage_regex) | DigestionEnzyme |
setRegExDescription(const String &value) | DigestionEnzyme |
setSynonyms(const std::set< String > &synonyms) | DigestionEnzyme |
setValueFromFile(const String &key, const String &value) override | DigestionEnzymeProtein | virtual
setXTandemID(const String &value) | DigestionEnzymeProtein |
synonyms_ | DigestionEnzyme | protected
xtandem_id_ | DigestionEnzymeProtein | protected
~DigestionEnzyme() | DigestionEnzyme | virtual
~DigestionEnzymeProtein() override | DigestionEnzymeProtein |