| OpenMS 2.5.0

Classes
Identification
Analysis

Protein and peptide identification classes. More...

## Classes

class | CompNovoIdentification
| run with CompNovoIdentification More...
class | CompNovoIdentificationBase
| run with CompNovoIdentificationBase More...
class | CompNovoIdentificationCID
| run with CompNovoIdentificationCID More...
class | AccurateMassSearchEngine
| An algorithm to search for exact mass matches from a spectrum against a database (e.g. HMDB). More...
class | ConsensusIDAlgorithm
| Abstract base class for all ConsensusID algorithms (that calculate a consensus from multiple ID runs). More...
class | ConsensusIDAlgorithmAverage
| Calculates a consensus from multiple ID runs by averaging the search scores. More...
class | ConsensusIDAlgorithmBest
| Calculates a consensus from multiple ID runs by taking the best search score. More...
class | ConsensusIDAlgorithmIdentity
| Abstract base class for ConsensusID algorithms that compare only identical sequences. More...
class | ConsensusIDAlgorithmPEPIons
| Calculates a consensus from multiple ID runs based on PEPs and shared ions. More...
class | ConsensusIDAlgorithmPEPMatrix
| Calculates a consensus from multiple ID runs based on PEPs and sequence similarities. More...
class | ConsensusIDAlgorithmRanks
| Calculates a consensus from multiple ID runs based on the ranks of the search hits. More...
class | ConsensusIDAlgorithmSimilarity
| Abstract base class for ConsensusID algorithms that take peptide similarity into account. More...
class | ConsensusIDAlgorithmWorst
| Calculates a consensus from multiple ID runs by taking the worst search score (conservative approach). More...
class | FalseDiscoveryRate
| Calculates false discovery rates (FDR) from identifications. More...
class | IDBoostGraph
| Creates and maintains a boost graph based on the OpenMS ID datastructures. More...
class | IDDecoyProbability
| IDDecoyProbability calculates probabilities using decoy approach. More...
class | IDRipper
| Ripping protein/peptide identification according their file origin. More...
class | PeptideProteinResolution
| Resolves shared peptides based on protein scores. More...

## Detailed Description

Protein and peptide identification classes.