| OpenMS 2.5.0

MzMLValidator Member List

This is the complete list of members for MzMLValidator, including all inherited members.

accession_att_ | SemanticValidator | protected
ActionMode enum name | XMLHandler | protected
asBool_(const String &in) | XMLHandler | inline protected
asDateTime_(String date_string) | XMLHandler | inline protected
asDouble_(const String &in) | XMLHandler | inline protected
asFloat_(const String &in) | XMLHandler | inline protected
asInt_(const String &in) | XMLHandler | inline protected
asInt_(const XMLCh *in) | XMLHandler | inline protected
asUInt_(const String &in) | XMLHandler | inline protected
attributeAsDouble_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsDouble_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
attributeAsDoubleList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsDoubleList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
attributeAsInt_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsInt_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
attributeAsIntList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsIntList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
attributeAsString_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsString_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
attributeAsStringList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsStringList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
binary_data_array_ | MzMLValidator | protected
binary_data_type_ | MzMLValidator | protected
characters(const XMLCh *const chars, const XMLSize_t) override | SemanticValidator | protected
check_term_value_types_ | SemanticValidator | protected
check_units_ | SemanticValidator | protected
checkUniqueIdentifiers_(const std::vector< ProteinIdentification > &prot_ids) | XMLHandler | protected
current_id_ | MzMLValidator | protected
cv_ | SemanticValidator | protected
cv_tag_ | SemanticValidator | protected
cv_terms_ | XMLHandler | protected
cvStringToEnum_(const Size section, const String &term, const char *message, const SignedSize result_on_error=0) | XMLHandler | inline protected
endElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname) override | SemanticValidator | protected
enforced_encoding_ | XMLFile | protected
enforceEncoding_(const String &encoding) | XMLFile | protected
equal_(const XMLCh *a, const XMLCh *b) const | XMLHandler | inline protected
error(const xercesc::SAXParseException &exception) override | XMLHandler | protected
error(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | protected
error_message_ | XMLHandler | mutable protected
errors_ | SemanticValidator | protected
errorString() | XMLHandler | protected
fatalError(const xercesc::SAXParseException &exception) override | XMLHandler | protected
fatalError(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | protected
file_ | XMLHandler | protected
fulfilled_ | SemanticValidator | protected
getCVTerm_(const xercesc::Attributes &attributes, CVTerm &parsed_term) | SemanticValidator | protected virtual
getLoadDetail() const | XMLHandler | protected virtual
getPath_(UInt remove_from_end=0) const override | MzMLValidator | protected virtual
getVersion() const | XMLFile |
handleTerm_(const String &path, const CVTerm &parsed_term) override | MzMLValidator | protected
OpenMS::Internal::SemanticValidator::handleTerm_(const String &path, const CVTerm &parsed_term) | SemanticValidator | protected virtual
isValid(const String &filename, std::ostream &os) | XMLFile |
LD_ALLDATA enum value | XMLHandler | protected
LD_COUNTS_WITHOPTIONS enum value | XMLHandler | protected
LD_RAWCOUNTS enum value | XMLHandler | protected
LOAD enum value | XMLHandler | protected
load_detail_ | XMLHandler | protected
LOADDETAIL enum name | XMLHandler | protected
locateTerm(const String &path, const CVTerm &parsed_term) const | SemanticValidator |
mapping_ | SemanticValidator | protected
MzMLValidator(const CVMappings &mapping, const ControlledVocabulary &cv) | MzMLValidator |
MzMLValidator() | MzMLValidator | private
MzMLValidator(const MzMLValidator &rhs) | MzMLValidator | private
name_att_ | SemanticValidator | protected
open_tags_ | SemanticValidator | protected
operator=(const MzMLValidator &rhs) | MzMLValidator | private
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
param_groups_ | MzMLValidator | protected
parse_(const String &filename, XMLHandler *handler) | XMLFile | protected
parseBuffer_(const std::string &buffer, XMLHandler *handler) | XMLFile | protected
reset() | XMLHandler | protected
rules_ | SemanticValidator | protected
save_(const String &filename, XMLHandler *handler) const | XMLFile | protected
schema_location_ | XMLFile | protected
schema_version_ | XMLFile | protected
SemanticValidator(const CVMappings &mapping, const ControlledVocabulary &cv) | SemanticValidator |
setAccessionAttribute(const String &accession) | SemanticValidator |
setCheckTermValueTypes(bool check) | SemanticValidator |
setCheckUnits(bool check) | SemanticValidator |
setLoadDetail(const LOADDETAIL d) | XMLHandler | protected virtual
setNameAttribute(const String &name) | SemanticValidator |
setTag(const String &tag) | SemanticValidator |
setUnitAccessionAttribute(const String &accession) | SemanticValidator |
setUnitNameAttribute(const String &name) | SemanticValidator |
setValueAttribute(const String &value) | SemanticValidator |
sm_ | XMLHandler | protected
startElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname, const xercesc::Attributes &attributes) override | MzMLValidator | protected
STORE enum value | XMLHandler | protected
unit_accession_att_ | SemanticValidator | protected
unit_name_att_ | SemanticValidator | protected
validate(const String &filename, StringList &errors, StringList &warnings) | SemanticValidator |
value_att_ | SemanticValidator | protected
version_ | XMLHandler | protected
warning(const xercesc::SAXParseException &exception) override | XMLHandler | protected
warning(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | protected
warnings_ | SemanticValidator | protected
writeTo(std::ostream &) | XMLHandler | protected virtual
writeUserParam_(const String &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | XMLHandler | protected
writeXMLEscape(const String &to_escape) | XMLHandler | inline protected static
XMLFile() | XMLFile |
XMLFile(const String &schema_location, const String &version) | XMLFile |
XMLHandler(const String &filename, const String &version) | XMLHandler | protected
~MzMLValidator() override | MzMLValidator |
~SemanticValidator() override | SemanticValidator |
~XMLFile() | XMLFile | virtual
~XMLHandler() override | XMLHandler | protected