| OpenMS 2.5.0

TraMLHandler Member List

This is the complete list of members for TraMLHandler, including all inherited members.

ActionMode enum name | XMLHandler |
actual_compound_ | TraMLHandler | protected
actual_configuration_ | TraMLHandler | protected
actual_contact_ | TraMLHandler | protected
actual_instrument_ | TraMLHandler | protected
actual_intermediate_products_ | TraMLHandler | protected
actual_interpretation_ | TraMLHandler | protected
actual_peptide_ | TraMLHandler | protected
actual_prediction_ | TraMLHandler | protected
actual_product_ | TraMLHandler | protected
actual_protein_ | TraMLHandler | protected
actual_publication_ | TraMLHandler | protected
actual_rt_ | TraMLHandler | protected
actual_software_ | TraMLHandler | protected
actual_sourcefile_ | TraMLHandler | protected
actual_target_ | TraMLHandler | protected
actual_transition_ | TraMLHandler | protected
actual_validation_ | TraMLHandler | protected
asBool_(const String &in) | XMLHandler | inline protected
asDateTime_(String date_string) | XMLHandler | inline protected
asDouble_(const String &in) | XMLHandler | inline protected
asFloat_(const String &in) | XMLHandler | inline protected
asInt_(const String &in) | XMLHandler | inline protected
asInt_(const XMLCh *in) | XMLHandler | inline protected
asUInt_(const String &in) | XMLHandler | inline protected
attributeAsDouble_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsDouble_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
attributeAsDoubleList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsDoubleList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
attributeAsInt_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsInt_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
attributeAsIntList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsIntList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
attributeAsString_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsString_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
attributeAsStringList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
attributeAsStringList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
cexp_ | TraMLHandler | protected
characters(const XMLCh *const chars, const XMLSize_t length) override | TraMLHandler |
checkUniqueIdentifiers_(const std::vector< ProteinIdentification > &prot_ids) | XMLHandler |
ConfigurationListType typedef | TraMLHandler |
cv_ | TraMLHandler | protected
cv_terms_ | XMLHandler | protected
cvStringToEnum_(const Size section, const String &term, const char *message, const SignedSize result_on_error=0) | XMLHandler | inline protected
endElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname) override | TraMLHandler |
equal_(const XMLCh *a, const XMLCh *b) const | XMLHandler | inline protected
error(const xercesc::SAXParseException &exception) override | XMLHandler |
error(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler |
error_message_ | XMLHandler | mutable protected
errorString() | XMLHandler |
exp_ | TraMLHandler | protected
fatalError(const xercesc::SAXParseException &exception) override | XMLHandler |
fatalError(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler |
file_ | XMLHandler | protected
getChildWithName_(const String &parent_accession, const String &name) const | TraMLHandler | protected
getLoadDetail() const | XMLHandler | virtual
handleCVParam_(const String &parent_parent_tag, const String &parent_tag, const CVTerm &cv_term) | TraMLHandler | protected
handleUserParam_(const String &parent_parent_tag, const String &parent_tag, const String &name, const String &type, const String &value) | TraMLHandler | protected
LD_ALLDATA enum value | XMLHandler |
LD_COUNTS_WITHOPTIONS enum value | XMLHandler |
LD_RAWCOUNTS enum value | XMLHandler |
LOAD enum value | XMLHandler |
load_detail_ | XMLHandler | protected
LOADDETAIL enum name | XMLHandler |
logger_ | TraMLHandler | protected
open_tags_ | XMLHandler | protected
operator=(const TraMLHandler &rhs) | TraMLHandler | private
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inline protected
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inline protected
ProductListType typedef | TraMLHandler |
reset() | XMLHandler |
setLoadDetail(const LOADDETAIL d) | XMLHandler | virtual
sm_ | XMLHandler | protected
startElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname, const xercesc::Attributes &attributes) override | TraMLHandler |
STORE enum value | XMLHandler |
tag_ | TraMLHandler | protected
TraMLHandler(const TargetedExperiment &exp, const String &filename, const String &version, const ProgressLogger &logger) | TraMLHandler |
TraMLHandler(TargetedExperiment &exp, const String &filename, const String &version, const ProgressLogger &logger) | TraMLHandler |
TraMLHandler() | TraMLHandler | private
TraMLHandler(const TraMLHandler &rhs) | TraMLHandler | private
version_ | XMLHandler | protected
warning(const xercesc::SAXParseException &exception) override | XMLHandler |
warning(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler |
writeConfiguration_(std::ostream &os, const std::vector< ReactionMonitoringTransition::Configuration >::const_iterator &cit) const | TraMLHandler | protected
writeCVParams_(std::ostream &os, const CVTList &cv_terms, UInt indent) const | TraMLHandler | inline protected
writeProduct_(std::ostream &os, const std::vector< ReactionMonitoringTransition::Product >::const_iterator &prod_it) const | TraMLHandler | protected
writeRetentionTime_(std::ostream &os, const TargetedExperimentHelper::RetentionTime &rt) const | TraMLHandler | protected
writeTarget_(std::ostream &os, const std::vector< IncludeExcludeTarget >::const_iterator &it) const | TraMLHandler | protected
writeTo(std::ostream &os) override | TraMLHandler | virtual
writeUserParam_(std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | TraMLHandler | protected
OpenMS::Internal::XMLHandler::writeUserParam_(const String &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | XMLHandler | protected
writeUserParams_(std::ostream &os, const std::vector< MetaInfoInterface > &meta, UInt indent) const | TraMLHandler | protected
writeXMLEscape(const String &to_escape) | XMLHandler | inline static
XMLHandler(const String &filename, const String &version) | XMLHandler |
~TraMLHandler() override | TraMLHandler |
~XMLHandler() override | XMLHandler |