| OpenMS 2.5.0

MascotInfile Member List

This is the complete list of members for MascotInfile, including all inherited members.

boundary_ | MascotInfile | protected
charges_ | MascotInfile | protected
cleavage_ | MascotInfile | protected
CMD enum value | ProgressLogger |
current_logger_ | ProgressLogger | mutable protected
db_ | MascotInfile | protected
endProgress() const | ProgressLogger |
form_version_ | MascotInfile | protected
getBoundary() | MascotInfile |
getCharges() | MascotInfile |
getCleavage() | MascotInfile |
getDB() | MascotInfile |
getFormVersion() | MascotInfile |
getHits() | MascotInfile |
getInstrument() | MascotInfile |
getLogType() const | ProgressLogger |
getMassType() | MascotInfile |
getMissedCleavages() | MascotInfile |
getModifications() | MascotInfile |
getNextSpectrum_(std::istream &is, std::vector< std::pair< double, double > > &spectrum, UInt &charge, double &precursor_mz, double &precursor_int, double &rt, String &title) | MascotInfile | protected
getPeakMassTolerance() | MascotInfile |
getPrecursorMassTolerance() | MascotInfile |
getSearchType() | MascotInfile |
getTaxonomy() | MascotInfile |
getVariableModifications() | MascotInfile |
GUI enum value | ProgressLogger |
hits_ | MascotInfile | protected
instrument_ | MascotInfile | protected
ion_mass_tolerance_ | MascotInfile | protected
last_invoke_ | ProgressLogger | mutable protected
load(const String &filename, MapType &exp) | MascotInfile | inline
LogType enum name | ProgressLogger |
logTypeToFactoryName_(LogType type) | ProgressLogger | protected static
MascotInfile() | MascotInfile |
mass_type_ | MascotInfile | protected
missed_cleavages_ | MascotInfile | protected
mods_ | MascotInfile | protected
mz_ | MascotInfile | protected
nextProgress() const | ProgressLogger |
NONE enum value | ProgressLogger |
operator=(const ProgressLogger &other) | ProgressLogger |
precursor_mass_tolerance_ | MascotInfile | protected
ProgressLogger() | ProgressLogger |
ProgressLogger(const ProgressLogger &other) | ProgressLogger |
recursion_depth_ | ProgressLogger | protected static
retention_time_ | MascotInfile | protected
search_title_ | MascotInfile | protected
search_type_ | MascotInfile | protected
setBoundary(const String &boundary) | MascotInfile |
setCharges(std::vector< Int > &charges) | MascotInfile |
setCleavage(const String &cleavage) | MascotInfile |
setDB(const String &db) | MascotInfile |
setFormVersion(const String &form_version) | MascotInfile |
setHits(const String &hits) | MascotInfile |
setInstrument(const String &instrument) | MascotInfile |
setLogType(LogType type) const | ProgressLogger |
setMassType(const String &mass_type) | MascotInfile |
setMissedCleavages(UInt missed_cleavages) | MascotInfile |
setModifications(const std::vector< String > &mods) | MascotInfile |
setPeakMassTolerance(float ion_mass_tolerance) | MascotInfile |
setPrecursorMassTolerance(float precursor_mass_tolerance) | MascotInfile |
setProgress(SignedSize value) const | ProgressLogger |
setSearchType(const String &search_type) | MascotInfile |
setTaxonomy(const String &taxonomy) | MascotInfile |
setVariableModifications(const std::vector< String > &mods) | MascotInfile |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger |
store(const String &filename, const PeakSpectrum &spec, double mz, double retention_time, String search_title) | MascotInfile |
store(const String &filename, const PeakMap &experiment, String search_title) | MascotInfile |
taxonomy_ | MascotInfile | protected
type_ | ProgressLogger | mutable protected
variable_mods_ | MascotInfile | protected
writeHeader_(FILE *fp) | MascotInfile | protected
writeMSExperiment_(FILE *fp, const String &filename, const PeakMap &experiment) | MascotInfile | protected
writeParameterHeader_(const String &name, FILE *fp, bool line_break=true) | MascotInfile | protected
writeSpectrum_(FILE *fp, const String &filename, const PeakSpectrum &peaks) | MascotInfile | protected
~MascotInfile() | MascotInfile | virtual
~ProgressLogger() | ProgressLogger |