| OpenMS 2.5.0

TOPPViewBase Member List

This is the complete list of members for TOPPViewBase, including all inherited members.

abortTOPPTool() | TOPPViewBase | protected slot
add_2d_context_ | TOPPViewBase | protected
addData(FeatureMapSharedPtrType feature_map, ConsensusMapSharedPtrType consensus_map, std::vector< PeptideIdentification > &peptides, ExperimentSharedPtrType peak_map, ODExperimentSharedPtrType on_disc_peak_map, LayerData::DataType data_type, bool show_as_1d, bool show_options, bool as_new_window=true, const String &filename="", const String &caption="", UInt window_id=0, Size spectrum_id=0) | TOPPViewBase |
addDataFile(const String &filename, bool show_options, bool add_to_recent, String caption="", UInt window_id=0, Size spectrum_id=0) | TOPPViewBase |
addRecentFile_(const String &filename) | TOPPViewBase | protected
annotateMS1FromMassFingerprinting_(const FeatureMap &identifications) | TOPPViewBase | protected
annotateWithID() | TOPPViewBase | slot
CAPTION_3D_SUFFIX_ | TOPPViewBase | private static
changeLabel(QAction *) | TOPPViewBase | slot
changeLayerFlag(bool) | TOPPViewBase | slot
changeUnassigned(QAction *) | TOPPViewBase | slot
check_defaults_ | DefaultParamHandler | protected
checkPreferences_() | TOPPViewBase | protected
closeByTab(int id) | TOPPViewBase | protected slot
closeEvent(QCloseEvent *event) override | TOPPViewBase | protected
closeFile() | TOPPViewBase | slot
ConsensusMapSharedPtrType typedef | TOPPViewBase |
ConsensusMapType typedef | TOPPViewBase |
containsIMData(const MSSpectrum &s) | TOPPViewBase | static
containsMS1Scans(const ExperimentType &exp) | TOPPViewBase | static
copyLayer(const QMimeData *data, QWidget *source, int id=-1) | TOPPViewBase | protected slot
current_path_ | TOPPViewBase | protected
DefaultParamHandler(const String &name) | DefaultParamHandler |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |
defaults_ | DefaultParamHandler | protected
defaultsToParam_() | DefaultParamHandler | protected
dm_elements_2d_ | TOPPViewBase | protected
dm_hull_2d_ | TOPPViewBase | protected
dm_hulls_2d_ | TOPPViewBase | protected
dm_ident_2d_ | TOPPViewBase | protected
dm_label_2d_ | TOPPViewBase | protected
dm_precursors_2d_ | TOPPViewBase | protected
dm_unassigned_2d_ | TOPPViewBase | protected
draw_group_1d_ | TOPPViewBase | protected
editMetadata() | TOPPViewBase | slot
enhancedWorkspaceWindowChanged(int id) | TOPPViewBase | protected slot
error_name_ | DefaultParamHandler | protected
estimateNoiseFromRandomMS1Scans(const ExperimentType &exp, UInt n_scans=10) | TOPPViewBase |
ExperimentSharedPtrType typedef | TOPPViewBase |
ExperimentType typedef | TOPPViewBase |
FeatureMapSharedPtrType typedef | TOPPViewBase |
FeatureMapType typedef | TOPPViewBase |
fileChanged_(const String &) | TOPPViewBase | protected slot
filter_dock_widget_ | TOPPViewBase | protected
filterContextMenu(const QPoint &pos) | TOPPViewBase | protected slot
filterEdit(QListWidgetItem *item) | TOPPViewBase | protected slot
filters_ | TOPPViewBase | protected
filters_check_box_ | TOPPViewBase | protected
finishTOPPToolExecution(int exitCode, QProcess::ExitStatus exitStatus) | TOPPViewBase | protected slot
getActive1DWidget() const | TOPPViewBase |
getActive2DWidget() const | TOPPViewBase |
getActive3DWidget() const | TOPPViewBase |
getActiveCanvas() const | TOPPViewBase |
getActiveSpectrumWidget() const | TOPPViewBase |
getCurrentLayer() const | TOPPViewBase |
getDefaults() const | DefaultParamHandler |
getFileList_(const String &path_overwrite="") | TOPPViewBase | protected
getFilenamesOfOpenFiles_() | TOPPViewBase | protected
getName() const | DefaultParamHandler |
getParameters() const | DefaultParamHandler |
getSpectraIdentificationViewWidget() | TOPPViewBase |
getSpectrumParameters(UInt dim) | TOPPViewBase |
getSubsections() const | DefaultParamHandler |
getWorkspace() const | TOPPViewBase |
group_label_2d_ | TOPPViewBase | protected
group_unassigned_2d_ | TOPPViewBase | protected
hasMS1Zeros(const ExperimentType &exp) | TOPPViewBase | static
hasPeptideIdentifications(const ExperimentType &map) | TOPPViewBase | static
identificationview_behavior_ | TOPPViewBase | protected
initializeDefaultParameters_() | TOPPViewBase | protected
intensity_button_group_ | TOPPViewBase | protected
layer_dock_widget_ | TOPPViewBase | protected
layerActivated() | TOPPViewBase | slot
layerContextMenu(const QPoint &pos) | TOPPViewBase | protected slot
layerDeactivated() | TOPPViewBase | slot
layerEdit(QListWidgetItem *) | TOPPViewBase | protected slot
layerFilterVisibilityChange(bool) | TOPPViewBase | protected slot
layers_view_ | TOPPViewBase | protected
layerSelectionChange(int) | TOPPViewBase | protected slot
layerStatistics() | TOPPViewBase | slot
layerVisibilityChange(QListWidgetItem *item) | TOPPViewBase | protected slot
layerZoomChanged() | TOPPViewBase | slot
linkZoom() | TOPPViewBase | slot
linkZoom_action_ | TOPPViewBase | protected
loadFile(QString) | TOPPViewBase | slot
loadFiles(const StringList &list, QSplashScreen *splash_screen) | TOPPViewBase |
loadPreferences(String filename="") | TOPPViewBase |
log_ | TOPPViewBase | protected
logContextMenu(const QPoint &pos) | TOPPViewBase | protected slot
LogState enum name | TOPPViewBase | protected
LS_ERROR enum value | TOPPViewBase | protected
LS_NOTICE enum value | TOPPViewBase | protected
LS_WARNING enum value | TOPPViewBase | protected
message_label_ | TOPPViewBase | protected
metadataFileDialog() | TOPPViewBase | slot
mz_label_ | TOPPViewBase | protected
ODExperimentSharedPtrType typedef | TOPPViewBase |
openExampleDialog() | TOPPViewBase | slot
openFileDialog() | TOPPViewBase | slot
openRecentFile() | TOPPViewBase | protected slot
operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual
param_ | DefaultParamHandler | protected
preferencesDialog() | TOPPViewBase | slot
projections_2d_ | TOPPViewBase | protected
recent_actions_ | TOPPViewBase | protected
recent_files_ | TOPPViewBase | protected
rerunTOPPTool() | TOPPViewBase | protected slot
resetZoom() | TOPPViewBase | slot
rt_label_ | TOPPViewBase | protected
runTOPPTool_() | TOPPViewBase | protected
saveLayerAll() | TOPPViewBase | slot
saveLayerVisible() | TOPPViewBase | slot
savePreferences() | TOPPViewBase |
setDrawMode1D(int) | TOPPViewBase | slot
setIntensityMode(int) | TOPPViewBase | slot
setName(const String &name) | DefaultParamHandler |
setParameters(const Param &param) | DefaultParamHandler |
showAboutDialog() | TOPPViewBase | slot
showCurrentPeaksAs2D() | TOPPViewBase | slot
showCurrentPeaksAs3D() | TOPPViewBase | slot
showCurrentPeaksAsDIA() | TOPPViewBase | slot
showCurrentPeaksAsIonMobility() | TOPPViewBase | slot
showCursorStatus(double mz, double rt) | TOPPViewBase | slot
showCursorStatusInvert(double mz, double rt) | TOPPViewBase | slot
showGoToDialog() | TOPPViewBase | slot
showLogMessage_(LogState state, const String &heading, const String &body) | TOPPViewBase | protected
showPreferences() | TOPPViewBase | slot
showSpectrumAlignmentDialog() | TOPPViewBase | slot
showSpectrumAs1D(int index) | TOPPViewBase | slot
showSpectrumAs1D(std::vector< int, std::allocator< int > > indices) | TOPPViewBase | slot
showSpectrumBrowser() | TOPPViewBase | protected slot
showSpectrumGenerationDialog() | TOPPViewBase | slot
showSpectrumMetaData(int spectrum_index) | TOPPViewBase | protected slot
showSpectrumWidgetInWindow(SpectrumWidget *sw, const String &caption) | TOPPViewBase |
showStatusMessage(std::string msg, OpenMS::UInt time) | TOPPViewBase | slot
showTOPPDialog() | TOPPViewBase | slot
showTOPPDialog_(bool visible) | TOPPViewBase | protected
showURL() | TOPPViewBase | slot
spectra_identification_view_widget_ | TOPPViewBase | protected
spectra_view_widget_ | TOPPViewBase | protected
spectraview_behavior_ | TOPPViewBase | protected
SpectrumType typedef | TOPPViewBase |
subsections_ | DefaultParamHandler | protected
tab_bar_ | TOPPViewBase | protected
TestTOPPView class | TOPPViewBase | friend
tileHorizontal() | TOPPViewBase | slot
tileVertical() | TOPPViewBase | slot
toggleAxisLegends() | TOPPViewBase | slot
toggleGridLines() | TOPPViewBase | slot
toggleInterestingMZs() | TOPPViewBase | slot
toggleProjections() | TOPPViewBase | slot
tool_bar_ | TOPPViewBase | protected
tool_bar_1d_ | TOPPViewBase | protected
tool_bar_2d_cons_ | TOPPViewBase | protected
tool_bar_2d_feat_ | TOPPViewBase | protected
tool_bar_2d_ident_ | TOPPViewBase | protected
tool_bar_2d_peak_ | TOPPViewBase | protected
topp_ | TOPPViewBase | protected
TOPPViewBase(QWidget *parent=nullptr) | TOPPViewBase |
updateCurrentPath() | TOPPViewBase | slot
updateFilterBar() | TOPPViewBase | slot
updateLayerBar() | TOPPViewBase | slot
updateMembers_() | DefaultParamHandler | protected virtual
updateMenu() | TOPPViewBase | slot
updateProcessLog() | TOPPViewBase | protected slot
updateRecentMenu_() | TOPPViewBase | protected
updateTabBar(QMdiSubWindow *w) | TOPPViewBase | slot
updateToolBar() | TOPPViewBase | slot
updateViewBar() | TOPPViewBase | slot
viewChanged(int) | TOPPViewBase | slot
views_dockwidget_ | TOPPViewBase | protected
views_tabwidget_ | TOPPViewBase | protected
viewTabwidgetDoubleClicked(int) | TOPPViewBase | slot
warn_empty_defaults_ | DefaultParamHandler | protected
watcher_ | TOPPViewBase | protected
watcher_msgbox_ | TOPPViewBase | protected
window_(int id) const | TOPPViewBase | protected
ws_ | TOPPViewBase | protected
zoom_together_ | TOPPViewBase | protected
~DefaultParamHandler() | DefaultParamHandler | virtual
~TOPPViewBase() override | TOPPViewBase |