| OpenMS 2.5.0

IDDecoyProbability Member List

This is the complete list of members for IDDecoyProbability, including all inherited members.

apply(std::vector< PeptideIdentification > &prob_ids, const std::vector< PeptideIdentification > &fwd_ids, const std::vector< PeptideIdentification > &rev_ids) | IDDecoyProbability |
apply(std::vector< PeptideIdentification > &ids) | IDDecoyProbability |
apply_(std::vector< PeptideIdentification > &ids, const std::vector< double > &rev_scores, const std::vector< double > &fwd_scores, const std::vector< double > &all_scores) | IDDecoyProbability | protected
check_defaults_ | DefaultParamHandler | protected
DefaultParamHandler(const String &name) | DefaultParamHandler |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |
defaults_ | DefaultParamHandler | protected
defaultsToParam_() | DefaultParamHandler | protected
error_name_ | DefaultParamHandler | protected
generateDistributionImage_(const std::vector< double > &ids, const String &formula, const String &filename) | IDDecoyProbability | protected
generateDistributionImage_(const std::vector< double > &all_ids, const Transformation_ &all_trans, const String &fwd_formula, const String &rev_formula, const String &filename) | IDDecoyProbability | protected
getDefaults() const | DefaultParamHandler |
getName() const | DefaultParamHandler |
getParameters() const | DefaultParamHandler |
getProbability_(const Math::GammaDistributionFitter::GammaDistributionFitResult &result_gamma, const Transformation_ &gamma_trafo, const Math::GaussFitter::GaussFitResult &result_gauss, const Transformation_ &gauss_trafo, double score) | IDDecoyProbability | protected
getSubsections() const | DefaultParamHandler |
IDDecoyProbability() | IDDecoyProbability |
IDDecoyProbability(const IDDecoyProbability &rhs) | IDDecoyProbability |
normalizeBins_(const std::vector< double > &scores, std::vector< double > &binned, Transformation_ &trafo) | IDDecoyProbability | protected
operator=(const IDDecoyProbability &rhs) | IDDecoyProbability |
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual
param_ | DefaultParamHandler | protected
setName(const String &name) | DefaultParamHandler |
setParameters(const Param &param) | DefaultParamHandler |
subsections_ | DefaultParamHandler | protected
updateMembers_() | DefaultParamHandler | protected virtual
warn_empty_defaults_ | DefaultParamHandler | protected
~DefaultParamHandler() | DefaultParamHandler | virtual
~IDDecoyProbability() override | IDDecoyProbability |