| OpenMS 2.5.0

MetaboliteSpectralMatching Member List

This is the complete list of members for MetaboliteSpectralMatching, including all inherited members.

check_defaults_ | DefaultParamHandler | protected
CMD enum value | ProgressLogger |
computeHyperScore(double fragment_mass_error, bool fragment_mass_tolerance_unit_ppm, const MSSpectrum &exp_spectrum, const MSSpectrum &db_spectrum, double mz_lower_bound=0.0) | MetaboliteSpectralMatching | static
computeHyperScore(double fragment_mass_error, bool fragment_mass_tolerance_unit_ppm, const MSSpectrum &exp_spectrum, const MSSpectrum &db_spectrum, std::vector< PeptideHit::PeakAnnotation > &annotations, double mz_lower_bound=0.0) | MetaboliteSpectralMatching | static
computeHyperScore_(double fragment_mass_error, bool fragment_mass_tolerance_unit_ppm, const MSSpectrum &exp_spectrum, const MSSpectrum &db_spectrum, std::vector< PeptideHit::PeakAnnotation > *annotations=0, double mz_lower_bound=0.0) | MetaboliteSpectralMatching | protected static
current_logger_ | ProgressLogger | mutable protected
DefaultParamHandler(const String &name) | DefaultParamHandler |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |
defaults_ | DefaultParamHandler | protected
defaultsToParam_() | DefaultParamHandler | protected
endProgress() const | ProgressLogger |
error_name_ | DefaultParamHandler | protected
exportMzTab_(const std::vector< SpectralMatch > &, MzTab &) | MetaboliteSpectralMatching | private
fragment_mz_error_ | MetaboliteSpectralMatching | private
getDefaults() const | DefaultParamHandler |
getLogType() const | ProgressLogger |
getName() const | DefaultParamHandler |
getParameters() const | DefaultParamHandler |
getSubsections() const | DefaultParamHandler |
GUI enum value | ProgressLogger |
ion_mode_ | MetaboliteSpectralMatching | private
last_invoke_ | ProgressLogger | mutable protected
LogType enum name | ProgressLogger |
logTypeToFactoryName_(LogType type) | ProgressLogger | protected static
MetaboliteSpectralMatching() | MetaboliteSpectralMatching |
mz_error_unit_ | MetaboliteSpectralMatching | private
nextProgress() const | ProgressLogger |
NONE enum value | ProgressLogger |
OpenMS::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other) | ProgressLogger |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual
param_ | DefaultParamHandler | protected
precursor_mz_error_ | MetaboliteSpectralMatching | private
ProgressLogger() | ProgressLogger |
ProgressLogger(const ProgressLogger &other) | ProgressLogger |
recursion_depth_ | ProgressLogger | protected static
report_mode_ | MetaboliteSpectralMatching | private
run(PeakMap &, PeakMap &, MzTab &) | MetaboliteSpectralMatching |
setLogType(LogType type) const | ProgressLogger |
setName(const String &name) | DefaultParamHandler |
setParameters(const Param &param) | DefaultParamHandler |
setProgress(SignedSize value) const | ProgressLogger |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger |
subsections_ | DefaultParamHandler | protected
type_ | ProgressLogger | mutable protected
updateMembers_() override | MetaboliteSpectralMatching | protected virtual
warn_empty_defaults_ | DefaultParamHandler | protected
~DefaultParamHandler() | DefaultParamHandler | virtual
~MetaboliteSpectralMatching() override | MetaboliteSpectralMatching |
~ProgressLogger() | ProgressLogger |