| OpenMS 2.5.0

PeakIntegrator Member List

This is the complete list of members for PeakIntegrator, including all inherited members.

baseline_type_ | PeakIntegrator | private
BASELINE_TYPE_BASETOBASE | PeakIntegrator | static
BASELINE_TYPE_VERTICALDIVISION | PeakIntegrator | static
BASELINE_TYPE_VERTICALDIVISION_MAX | PeakIntegrator | static
BASELINE_TYPE_VERTICALDIVISION_MIN | PeakIntegrator | static
calculatePeakShapeMetrics(const MSChromatogram &chromatogram, const double left, const double right, const double peak_height, const double peak_apex_pos) const | PeakIntegrator |
calculatePeakShapeMetrics(const MSChromatogram &chromatogram, MSChromatogram::ConstIterator &left, MSChromatogram::ConstIterator &right, const double peak_height, const double peak_apex_pos) const | PeakIntegrator |
calculatePeakShapeMetrics(const MSSpectrum &spectrum, const double left, const double right, const double peak_height, const double peak_apex_pos) const | PeakIntegrator |
calculatePeakShapeMetrics(const MSSpectrum &spectrum, MSSpectrum::ConstIterator &left, MSSpectrum::ConstIterator &right, const double peak_height, const double peak_apex_pos) const | PeakIntegrator |
calculatePeakShapeMetrics_(const PeakContainerT &pc, double left, double right, const double peak_height, const double peak_apex_pos) const | PeakIntegrator | inline protected
check_defaults_ | DefaultParamHandler | protected
DefaultParamHandler(const String &name) | DefaultParamHandler |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |
defaults_ | DefaultParamHandler | protected
defaultsToParam_() | DefaultParamHandler | protected
emg_ | PeakIntegrator | private
EMGPreProcess_(const PeakContainerT &pc, PeakContainerT &emg_pc, double &left, double &right) const | PeakIntegrator | inline private
error_name_ | DefaultParamHandler | protected
estimateBackground(const MSChromatogram &chromatogram, const double left, const double right, const double peak_apex_pos) const | PeakIntegrator |
estimateBackground(const MSChromatogram &chromatogram, MSChromatogram::ConstIterator &left, MSChromatogram::ConstIterator &right, const double peak_apex_pos) const | PeakIntegrator |
estimateBackground(const MSSpectrum &spectrum, const double left, const double right, const double peak_apex_pos) const | PeakIntegrator |
estimateBackground(const MSSpectrum &spectrum, MSSpectrum::ConstIterator &left, MSSpectrum::ConstIterator &right, const double peak_apex_pos) const | PeakIntegrator |
estimateBackground_(const PeakContainerT &pc, double left, double right, const double peak_apex_pos) const | PeakIntegrator | inline protected
findPosAtPeakHeightPercent_(PeakContainerConstIteratorT it_left, PeakContainerConstIteratorT it_right, PeakContainerConstIteratorT it_end, const double peak_height, const double percent, const bool is_left_half) const | PeakIntegrator | inline protected
fit_EMG_ | PeakIntegrator | private
getDefaultParameters(Param &params) | PeakIntegrator |
getDefaults() const | DefaultParamHandler |
getName() const | DefaultParamHandler |
getParameters() const | DefaultParamHandler |
getSubsections() const | DefaultParamHandler |
integratePeak(const MSChromatogram &chromatogram, const double left, const double right) const | PeakIntegrator |
integratePeak(const MSChromatogram &chromatogram, MSChromatogram::ConstIterator &left, MSChromatogram::ConstIterator &right) const | PeakIntegrator |
integratePeak(const MSSpectrum &spectrum, const double left, const double right) const | PeakIntegrator |
integratePeak(const MSSpectrum &spectrum, MSSpectrum::ConstIterator &left, MSSpectrum::ConstIterator &right) const | PeakIntegrator |
integratePeak_(const PeakContainerT &pc, double left, double right) const | PeakIntegrator | inline protected
integration_type_ | PeakIntegrator | private
INTEGRATION_TYPE_INTENSITYSUM | PeakIntegrator | static
INTEGRATION_TYPE_SIMPSON | PeakIntegrator | static
INTEGRATION_TYPE_TRAPEZOID | PeakIntegrator | static
operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual
param_ | DefaultParamHandler | protected
PeakIntegrator() | PeakIntegrator |
setName(const String &name) | DefaultParamHandler |
setParameters(const Param &param) | DefaultParamHandler |
simpson_(PeakContainerConstIteratorT it_begin, PeakContainerConstIteratorT it_end) const | PeakIntegrator | inline protected
subsections_ | DefaultParamHandler | protected
updateMembers_() | PeakIntegrator | protected virtual
warn_empty_defaults_ | DefaultParamHandler | protected
~DefaultParamHandler() | DefaultParamHandler | virtual
~PeakIntegrator() | PeakIntegrator | virtual