| OpenMS 2.5.0

TransitionPQPFile Member List

This is the complete list of members for TransitionPQPFile, including all inherited members.

check_defaults_ | DefaultParamHandler | protected
CMD enum value | ProgressLogger |
convertPQPToTargetedExperiment(const char *filename, OpenMS::TargetedExperiment &targeted_exp, bool legacy_traml_id=false) | TransitionPQPFile |
convertPQPToTargetedExperiment(const char *filename, OpenSwath::LightTargetedExperiment &targeted_exp, bool legacy_traml_id=false) | TransitionPQPFile |
convertTargetedExperimentToPQP(const char *filename, OpenMS::TargetedExperiment &targeted_exp) | TransitionPQPFile |
convertTargetedExperimentToTSV(const char *filename, OpenMS::TargetedExperiment &targeted_exp) | TransitionTSVFile |
convertTransition_(const ReactionMonitoringTransition *it, OpenMS::TargetedExperiment &targeted_exp) | TransitionTSVFile | protected
convertTSVToTargetedExperiment(const char *filename, FileTypes::Type filetype, OpenMS::TargetedExperiment &targeted_exp) | TransitionTSVFile |
convertTSVToTargetedExperiment(const char *filename, FileTypes::Type filetype, OpenSwath::LightTargetedExperiment &targeted_exp) | TransitionTSVFile |
current_logger_ | ProgressLogger | mutable protected
DefaultParamHandler(const String &name) | DefaultParamHandler |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |
defaults_ | DefaultParamHandler | protected
defaultsToParam_() | DefaultParamHandler | protected
endProgress() const | ProgressLogger |
error_name_ | DefaultParamHandler | protected
getDefaults() const | DefaultParamHandler |
getLogType() const | ProgressLogger |
getName() const | DefaultParamHandler |
getParameters() const | DefaultParamHandler |
getSubsections() const | DefaultParamHandler |
GUI enum value | ProgressLogger |
last_invoke_ | ProgressLogger | mutable protected
LogType enum name | ProgressLogger |
logTypeToFactoryName_(LogType type) | ProgressLogger | protected static
nextProgress() const | ProgressLogger |
NONE enum value | ProgressLogger |
OpenMS::operator=(const ProgressLogger &other) | ProgressLogger |
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual
param_ | DefaultParamHandler | protected
ProgressLogger() | ProgressLogger |
ProgressLogger(const ProgressLogger &other) | ProgressLogger |
readPQPInput_(const char *filename, std::vector< TSVTransition > &transition_list, bool legacy_traml_id=false) | TransitionPQPFile | private
recursion_depth_ | ProgressLogger | protected static
setLogType(LogType type) const | ProgressLogger |
setName(const String &name) | DefaultParamHandler |
setParameters(const Param &param) | DefaultParamHandler |
setProgress(SignedSize value) const | ProgressLogger |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger |
subsections_ | DefaultParamHandler | protected
TransitionPQPFile() | TransitionPQPFile |
TransitionTSVFile() | TransitionTSVFile |
TSVToTargetedExperiment_(std::vector< TSVTransition > &transition_list, OpenMS::TargetedExperiment &exp) | TransitionTSVFile | protected
TSVToTargetedExperiment_(std::vector< TSVTransition > &transition_list, OpenSwath::LightTargetedExperiment &exp) | TransitionTSVFile | protected
type_ | ProgressLogger | mutable protected
updateMembers_() override | TransitionTSVFile | protected virtual
validateTargetedExperiment(const OpenMS::TargetedExperiment &targeted_exp) | TransitionTSVFile |
warn_empty_defaults_ | DefaultParamHandler | protected
writePQPOutput_(const char *filename, OpenMS::TargetedExperiment &targeted_exp) | TransitionPQPFile | private
~DefaultParamHandler() | DefaultParamHandler | virtual
~ProgressLogger() | ProgressLogger |
~TransitionPQPFile() override | TransitionPQPFile |
~TransitionTSVFile() override | TransitionTSVFile |