| OpenMS 2.5.0

MultiplexFilteringCentroided Member List

This is the complete list of members for MultiplexFilteringCentroided, including all inherited members.

averagine_similarity_ | MultiplexFiltering | protected
averagine_similarity_scaling_ | MultiplexFiltering | protected
averagine_type_ | MultiplexFiltering | protected
blacklist_ | MultiplexFiltering | protected
blacklistPeak_(const MultiplexFilteredPeak &peak) | MultiplexFiltering | protected
blacklistPeak_(const MultiplexFilteredPeak &peak, unsigned pattern_idx) | MultiplexFiltering | protected
checkForSignificantPeak_(double mz, double mz_tolerance, MSExperiment::ConstIterator &it_rt, double intensity_first_peak) const | MultiplexFiltering | protected
CMD enum value | ProgressLogger |
current_logger_ | ProgressLogger | mutable protected
endProgress() const | ProgressLogger |
exp_centroided_ | MultiplexFiltering | protected
exp_centroided_mapping_ | MultiplexFiltering | protected
exp_centroided_white_ | MultiplexFiltering | protected
filter() | MultiplexFilteringCentroided |
filterAveragineModel_(const MultiplexIsotopicPeakPattern &pattern, const MultiplexFilteredPeak &peak) const | MultiplexFiltering | protected
filterPeakPositions_(const MSSpectrum::ConstIterator &it_mz, const MSExperiment::ConstIterator &it_rt_begin, const MSExperiment::ConstIterator &it_rt_band_begin, const MSExperiment::ConstIterator &it_rt_band_end, const MultiplexIsotopicPeakPattern &pattern, MultiplexFilteredPeak &peak) const | MultiplexFiltering | protected
filterPeptideCorrelation_(const MultiplexIsotopicPeakPattern &pattern, const MultiplexFilteredPeak &peak) const | MultiplexFiltering | protected
getBlacklist() | MultiplexFiltering |
getCentroidedExperiment() | MultiplexFiltering |
getLogType() const | ProgressLogger |
GUI enum value | ProgressLogger |
intensity_cutoff_ | MultiplexFiltering | protected
isotopes_per_peptide_max_ | MultiplexFiltering | protected
isotopes_per_peptide_min_ | MultiplexFiltering | protected
last_invoke_ | ProgressLogger | mutable protected
LogType enum name | ProgressLogger |
logTypeToFactoryName_(LogType type) | ProgressLogger | protected static
MultiplexFiltering(const MSExperiment &exp_centroided, const std::vector< MultiplexIsotopicPeakPattern > &patterns, int isotopes_per_peptide_min, int isotopes_per_peptide_max, double intensity_cutoff, double rt_band, double mz_tolerance, bool mz_tolerance_unit, double peptide_similarity, double averagine_similarity, double averagine_similarity_scaling, String averagine_type="peptide") | MultiplexFiltering |
MultiplexFilteringCentroided(const MSExperiment &exp_centroided, const std::vector< MultiplexIsotopicPeakPattern > &patterns, int isotopes_per_peptide_min, int isotopes_per_peptide_max, double intensity_cutoff, double rt_band, double mz_tolerance, bool mz_tolerance_unit, double peptide_similarity, double averagine_similarity, double averagine_similarity_scaling, String averagine_type="peptide") | MultiplexFilteringCentroided |
mz_tolerance_ | MultiplexFiltering | protected
mz_tolerance_unit_in_ppm_ | MultiplexFiltering | protected
nextProgress() const | ProgressLogger |
NONE enum value | ProgressLogger |
operator=(const ProgressLogger &other) | ProgressLogger |
patterns_ | MultiplexFiltering | protected
peptide_similarity_ | MultiplexFiltering | protected
ProgressLogger() | ProgressLogger |
ProgressLogger(const ProgressLogger &other) | ProgressLogger |
recursion_depth_ | ProgressLogger | protected static
rt_band_ | MultiplexFiltering | protected
setLogType(LogType type) const | ProgressLogger |
setProgress(SignedSize value) const | ProgressLogger |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger |
type_ | ProgressLogger | mutable protected
updateWhiteMSExperiment_() | MultiplexFiltering | protected
White2Original typedef | MultiplexFiltering |
~ProgressLogger() | ProgressLogger |