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FeatureFinderAlgorithmSHCtrl.h
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30 // --------------------------------------------------------------------------
31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Florian Zeller $
33 // --------------------------------------------------------------------------
34
35 #pragma once
36
37 #include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnConfig.h>
38 #include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.h>
39
40 #include <OpenMS/KERNEL/Feature.h>
41 #include <OpenMS/DATASTRUCTURES/Param.h>
42
43 #include <vector>
44 #include <map>
45
46 #include <boost/shared_ptr.hpp>
47
48 namespace OpenMS
49 {
55 class SUPERHIRN_DLLAPI FeatureFinderAlgorithmSHCtrl
56 {
57 public:
58 typedef std::pair<double, boost::shared_ptr<RawData> > MyMap;
59 typedef std::vector<MyMap> Vec;
60
61
62 FeatureFinderAlgorithmSHCtrl() {}
63
64 std::vector<Feature> extractPeaks(Vec datavec);
65
66 void initParams(Param param);
67 };
68 }
69
OpenMS::FeatureFinderAlgorithmSHCtrl::FeatureFinderAlgorithmSHCtrl
FeatureFinderAlgorithmSHCtrl()
Definition: FeatureFinderAlgorithmSHCtrl.h:62
Feature.h
OpenMS::FeatureFinderAlgorithmSHCtrl::Vec
std::vector< MyMap > Vec
Definition: FeatureFinderAlgorithmSHCtrl.h:59
OpenMS::FeatureFinderAlgorithmSHCtrl
A facade for various Superhirn FeatureFinder classes. Use FeatureFinderAlgorithmSH instead...
Definition: FeatureFinderAlgorithmSHCtrl.h:55
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
Param.h
OpenMS::Param
Management and storage of parameters / INI files.
Definition: Param.h:73
RawData.h
OpenMS::FeatureFinderAlgorithmSHCtrl::MyMap
std::pair< double, boost::shared_ptr< RawData > > MyMap
Definition: FeatureFinderAlgorithmSHCtrl.h:58