| OpenMS 2.5.0

Classes | Namespaces
CsiFingerIdMzTabWriter.h File Reference
`#include <OpenMS/FORMAT/MzTabFile.h>`

Go to the source code of this file.

## Classes

class | CsiFingerIdMzTabWriter
struct | CsiFingerIdMzTabWriter::CsiAdapterHit
| Internal structure used in SiriusAdapter that is used for the conversion of the Csi:FingerID output to an mzTab. More...
struct | CsiFingerIdMzTabWriter::CsiAdapterIdentification
struct | CsiFingerIdMzTabWriter::CsiAdapterRun

## Namespaces

| OpenMS
| Main OpenMS namespace.

## Class Documentation

## ◆ OpenMS::CsiFingerIdMzTabWriter::CsiAdapterHit

struct OpenMS::CsiFingerIdMzTabWriter::CsiAdapterHit

Internal structure used in SiriusAdapter that is used for the conversion of the Csi:FingerID output to an mzTab.

CsiAdapterHit: inchikey2D (String) inchi (String) rank (int) - Rank of the identification for a compound (spectrum) calculated by CSI:FingerID molecular_formula (String) - sumformula score (int) - Score of the identification for a compound (spectrum) calculated by CSI:FingerID name (String) smiles (String) pubchemids (vector<String>) - Pubchemid as reference links (vector<String>) - Links to the database

CsiAdapterIdentification: scan_index (int) - Index of the spectrum used for identification scan_number (int) - NativeId of the spectrum used for identification feature_id (String) - FeatureId (if spectrum was assigned to a feature) hits (vector<CsiAdapterHit>)

CsiAdapterRun: identifications (vector<CSIAdapterIdentification>)

Class Members
String | inchi |
String | inchikey2D |
vector< String > | links |
String | molecular_formula |
String | name |
vector< String > | pubchemids |
unsigned int | rank |
double | score |
String | smiles |

## ◆ OpenMS::CsiFingerIdMzTabWriter::CsiAdapterIdentification

struct OpenMS::CsiFingerIdMzTabWriter::CsiAdapterIdentification

Class Members
String | feature_id |
vector< CsiAdapterHit > | hits |
double | mz |
String | native_id |
double | rt |
int | scan_index |
int | scan_number |

## ◆ OpenMS::CsiFingerIdMzTabWriter::CsiAdapterRun

struct OpenMS::CsiFingerIdMzTabWriter::CsiAdapterRun

Class Members
vector< CsiAdapterIdentification > | identifications |