| OpenMS 2.5.0

XQuestResultXMLFile Member List

This is the complete list of members for XQuestResultXMLFile, including all inherited members.

CMD enum value | ProgressLogger |
current_logger_ | ProgressLogger | mutable protected
endProgress() const | ProgressLogger |
enforced_encoding_ | XMLFile | protected
enforceEncoding_(const String &encoding) | XMLFile | protected
getLogType() const | ProgressLogger |
getMaxScore() const | XQuestResultXMLFile |
getMinScore() const | XQuestResultXMLFile |
getNumberOfHits() const | XQuestResultXMLFile |
getVersion() const | XMLFile |
getxQuestBase64EncodedSpectrum_(const PeakSpectrum &spec, String header) | XQuestResultXMLFile | private static
GUI enum value | ProgressLogger |
isValid(const String &filename, std::ostream &os) | XMLFile |
last_invoke_ | ProgressLogger | mutable protected
load(const String &filename, std::vector< PeptideIdentification > &pep_ids, std::vector< ProteinIdentification > &prot_ids) | XQuestResultXMLFile |
LogType enum name | ProgressLogger |
logTypeToFactoryName_(LogType type) | ProgressLogger | protected static
max_score_ | XQuestResultXMLFile | private
min_score_ | XQuestResultXMLFile | private
n_hits_ | XQuestResultXMLFile | private
nextProgress() const | ProgressLogger |
NONE enum value | ProgressLogger |
operator=(const ProgressLogger &other) | ProgressLogger |
parse_(const String &filename, XMLHandler *handler) | XMLFile | protected
parseBuffer_(const std::string &buffer, XMLHandler *handler) | XMLFile | protected
ProgressLogger() | ProgressLogger |
ProgressLogger(const ProgressLogger &other) | ProgressLogger |
recursion_depth_ | ProgressLogger | protected static
save_(const String &filename, XMLHandler *handler) const | XMLFile | protected
schema_location_ | XMLFile | protected
schema_version_ | XMLFile | protected
setLogType(LogType type) const | ProgressLogger |
setProgress(SignedSize value) const | ProgressLogger |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger |
store(const String &filename, const std::vector< ProteinIdentification > &poid, const std::vector< PeptideIdentification > &peid) const | XQuestResultXMLFile |
type_ | ProgressLogger | mutable protected
wrap_(const String &input, Size width, String &output) | XQuestResultXMLFile | private static
writeXQuestXMLSpec(const String &out_file, const String &base_name, const OPXLDataStructs::PreprocessedPairSpectra &preprocessed_pair_spectra, const std::vector< std::pair< Size, Size > > &spectrum_pairs, const std::vector< std::vector< OPXLDataStructs::CrossLinkSpectrumMatch > > &all_top_csms, const PeakMap &spectra) | XQuestResultXMLFile | static
writeXQuestXMLSpec(const String &out_file, const String &base_name, const std::vector< std::vector< OPXLDataStructs::CrossLinkSpectrumMatch > > &all_top_csms, const PeakMap &spectra) | XQuestResultXMLFile | static
XMLFile() | XMLFile |
XMLFile(const String &schema_location, const String &version) | XMLFile |
XQuestResultXMLFile() | XQuestResultXMLFile |
~ProgressLogger() | ProgressLogger |
~XMLFile() | XMLFile | virtual
~XQuestResultXMLFile() override | XQuestResultXMLFile |