| OpenMS 2.5.0

Classes | Functions
OpenMS::TargetedExperimentHelper Namespace Reference

This class stores helper structures that are used in multiple classes of the TargetedExperiment (e.g. ReactionMonitoringTransition and IncludeExcludeTarget). More...

## Classes

class | Compound
| Represents a compound (small molecule) More...
struct | Configuration
struct | Contact
struct | CV
struct | Instrument
struct | Interpretation
| Product ion interpretation. More...
class | Peptide
| Represents a peptide (amino acid sequence) More...
class | PeptideCompound
| Base class to represent either a peptide or a compound. More...
struct | Prediction
struct | Protein
struct | Publication
class | RetentionTime
| This class stores a retention time structure that is used in TargetedExperiment (representing a TraML file) More...
struct | TraMLProduct
| Represents a product ion. More...

## Functions

OpenMS::AASequence | getAASequence (const Peptide &peptide)
| helper function that converts a Peptide object to a AASequence object More...
void | setModification (int location, int max_size, String modification, OpenMS::AASequence &aas)
| helper function that sets a modification on a AASequence object More...

## Detailed Description

This class stores helper structures that are used in multiple classes of the TargetedExperiment (e.g. ReactionMonitoringTransition and IncludeExcludeTarget).

## Function Documentation

## ◆ getAASequence()

OpenMS::AASequence OpenMS::TargetedExperimentHelper::getAASequence | ( | const Peptide & | peptide | ) |

helper function that converts a Peptide object to a AASequence object

## ◆ setModification()

void OpenMS::TargetedExperimentHelper::setModification | ( | int | location,
|  | int | max_size,
|  | String | modification,
|  | OpenMS::AASequence & | aas
| ) |  |

helper function that sets a modification on a AASequence object