| OpenMS 2.5.0

FeatureGroupingAlgorithmKD Member List

This is the complete list of members for FeatureGroupingAlgorithmKD, including all inherited members.

addConsensusFeature_(const std::vector< Size > &indices, const KDTreeFeatureMaps &kd_data, ConsensusMap &out) const | FeatureGroupingAlgorithmKD | private
check_defaults_ | DefaultParamHandler | protected
CMD enum value | ProgressLogger |
computeBestClusterForCenter_(Size i, std::vector< Size > &cf_indices, const std::vector< Int > &assigned, const KDTreeFeatureMaps &kd_data) const | FeatureGroupingAlgorithmKD | private
create() | FeatureGroupingAlgorithmKD | inline static
current_logger_ | ProgressLogger | mutable protected
DefaultParamHandler(const String &name) | DefaultParamHandler |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |
defaults_ | DefaultParamHandler | protected
defaultsToParam_() | DefaultParamHandler | protected
endProgress() const | ProgressLogger |
error_name_ | DefaultParamHandler | protected
feature_distance_ | FeatureGroupingAlgorithmKD | private
FeatureGroupingAlgorithm() | FeatureGroupingAlgorithm |
FeatureGroupingAlgorithmKD() | FeatureGroupingAlgorithmKD |
FeatureGroupingAlgorithmKD(const FeatureGroupingAlgorithmKD &) | FeatureGroupingAlgorithmKD | private
getDefaults() const | DefaultParamHandler |
getLogType() const | ProgressLogger |
getName() const | DefaultParamHandler |
getParameters() const | DefaultParamHandler |
getProductName() | FeatureGroupingAlgorithmKD | inline static
getSubsections() const | DefaultParamHandler |
group(const std::vector< FeatureMap > &maps, ConsensusMap &out) override | FeatureGroupingAlgorithmKD | virtual
group(const std::vector< ConsensusMap > &maps, ConsensusMap &out) override | FeatureGroupingAlgorithmKD | virtual
group_(const std::vector< MapType > &input_maps, ConsensusMap &out) | FeatureGroupingAlgorithmKD | private
GUI enum value | ProgressLogger |
last_invoke_ | ProgressLogger | mutable protected
LogType enum name | ProgressLogger |
logTypeToFactoryName_(LogType type) | ProgressLogger | protected static
mz_ppm_ | FeatureGroupingAlgorithmKD | private
mz_tol_ | FeatureGroupingAlgorithmKD | private
nextProgress() const | ProgressLogger |
NONE enum value | ProgressLogger |
operator=(const FeatureGroupingAlgorithmKD &) | FeatureGroupingAlgorithmKD | private
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other) | ProgressLogger |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual
param_ | DefaultParamHandler | protected
postprocess_(const std::vector< MapType > &maps, ConsensusMap &out) | FeatureGroupingAlgorithm | inline protected
progress_ | FeatureGroupingAlgorithmKD | private
ProgressLogger() | ProgressLogger |
ProgressLogger(const ProgressLogger &other) | ProgressLogger |
recursion_depth_ | ProgressLogger | protected static
registerChildren() | FeatureGroupingAlgorithm | static
rt_tol_secs_ | FeatureGroupingAlgorithmKD | private
runClustering_(const KDTreeFeatureMaps &kd_data, ConsensusMap &out) | FeatureGroupingAlgorithmKD | private
setLogType(LogType type) const | ProgressLogger |
setName(const String &name) | DefaultParamHandler |
setParameters(const Param &param) | DefaultParamHandler |
setProgress(SignedSize value) const | ProgressLogger |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger |
subsections_ | DefaultParamHandler | protected
transferSubelements(const std::vector< ConsensusMap > &maps, ConsensusMap &out) const | FeatureGroupingAlgorithm |
type_ | ProgressLogger | mutable protected
updateClusterProxies_(std::set< ClusterProxyKD > &potential_clusters, std::vector< ClusterProxyKD > &cluster_for_idx, const std::set< Size > &update_these, const std::vector< Int > &assigned, const KDTreeFeatureMaps &kd_data) | FeatureGroupingAlgorithmKD | private
updateMembers_() | DefaultParamHandler | protected virtual
warn_empty_defaults_ | DefaultParamHandler | protected
~DefaultParamHandler() | DefaultParamHandler | virtual
~FeatureGroupingAlgorithm() override | FeatureGroupingAlgorithm |
~FeatureGroupingAlgorithmKD() override | FeatureGroupingAlgorithmKD |
~ProgressLogger() | ProgressLogger |