| OpenMS 2.5.0

PTMXMLHandler.h
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2 // OpenMS -- Open-Source Mass Spectrometry
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4 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
5 // ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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30 // --------------------------------------------------------------------------
31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: $
33 // --------------------------------------------------------------------------
34
35 #pragma once
36
37 #include <OpenMS/FORMAT/HANDLERS/XMLHandler.h>
38
39 #include <vector>
40 #include <map>
41 #include <fstream>
42
43 namespace OpenMS
44 {
45 namespace Internal
46 {
50 class OPENMS_DLLAPI PTMXMLHandler :
51 public XMLHandler
52 {
53 public:
55 PTMXMLHandler(std::map<String, std::pair<String, String> > & ptm_informations, const String & filename);
56
58 ~PTMXMLHandler() override;
59
61 void writeTo(std::ostream & os) override;
62
63 // Docu in base class
64 void endElement(const XMLCh * const /*uri*/, const XMLCh * const /*local_name*/, const XMLCh * const qname) override;
65
66 // Docu in base class
67 void startElement(const XMLCh * const /*uri*/, const XMLCh * const /*local_name*/, const XMLCh * const qname, const xercesc::Attributes & attributes) override;
68
69 // Docu in base class
70 void characters(const XMLCh * const chars, const XMLSize_t /*length*/) override;
71
72 protected:
73 std::map<String, std::pair<String, String> > & ptm_informations_;
74 String name_, tag_, composition_;
75 bool open_tag_;
76 };
77
78 } // namespace Internal
79
80 } // namespace OpenMS
81
OpenMS::String
A more convenient string class.
Definition: String.h:58
XMLHandler.h
OpenMS::Internal::PTMXMLHandler::tag_
String tag_
Definition: PTMXMLHandler.h:74
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
OpenMS::Internal::PTMXMLHandler
Handler that is used for parsing PTMXML data.
Definition: PTMXMLHandler.h:50
OpenMS::Internal::PTMXMLHandler::open_tag_
bool open_tag_
Definition: PTMXMLHandler.h:75
OpenMS::Internal::PTMXMLHandler::ptm_informations_
std::map< String, std::pair< String, String > > & ptm_informations_
Definition: PTMXMLHandler.h:73
OpenMS::Internal::XMLHandler
Base class for XML handlers.
Definition: XMLHandler.h:151