| OpenMS 2.5.0

MSSim Member List

This is the complete list of members for MSSim, including all inherited members.

check_defaults_ | DefaultParamHandler | protected
CMD enum value | ProgressLogger |
consensus_map_ | MSSim | private
contaminants_map_ | MSSim | private
createFeatureMap_(const SimTypes::SampleProteins &peptides, SimTypes::FeatureMapSim &features, Size map_index) | MSSim | protected
current_logger_ | ProgressLogger | mutable protected
DefaultParamHandler(const String &name) | DefaultParamHandler |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |
defaults_ | DefaultParamHandler | protected
defaultsToParam_() | DefaultParamHandler | protected
endProgress() const | ProgressLogger |
error_name_ | DefaultParamHandler | protected
experiment_ | MSSim | private
feature_maps_ | MSSim | private
getChargeConsensus() | MSSim |
getContaminants() const | MSSim |
getDefaults() const | DefaultParamHandler |
getExperiment() const | MSSim |
getFeatureIdentifications(std::vector< ProteinIdentification > &proteins, std::vector< PeptideIdentification > &peptides) const | MSSim |
getIdentifications(std::vector< ProteinIdentification > &proteins, std::vector< PeptideIdentification > &peptides) const | MSSim |
getLabelingConsensus() | MSSim |
getLogType() const | ProgressLogger |
getMS2Identifications(std::vector< ProteinIdentification > &proteins, std::vector< PeptideIdentification > &peptides) const | MSSim |
getName() const | DefaultParamHandler |
getParameters() const | MSSim |
getPeakMap() const | MSSim |
getSimulatedFeatures() const | MSSim |
getSubsections() const | DefaultParamHandler |
GUI enum value | ProgressLogger |
labeler_ | MSSim | private
last_invoke_ | ProgressLogger | mutable protected
LogType enum name | ProgressLogger |
logTypeToFactoryName_(LogType type) | ProgressLogger | protected static
MSSim() | MSSim |
nextProgress() const | ProgressLogger |
NONE enum value | ProgressLogger |
OpenMS::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other) | ProgressLogger |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual
param_ | DefaultParamHandler | protected
peak_map_ | MSSim | private
ProgressLogger() | ProgressLogger |
ProgressLogger(const ProgressLogger &other) | ProgressLogger |
recursion_depth_ | ProgressLogger | protected static
setLogType(LogType type) const | ProgressLogger |
setName(const String &name) | DefaultParamHandler |
setParameters(const Param &param) | DefaultParamHandler |
setProgress(SignedSize value) const | ProgressLogger |
simulate(SimTypes::MutableSimRandomNumberGeneratorPtr rnd_gen, SimTypes::SampleChannels &peptides) | MSSim |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger |
subsections_ | DefaultParamHandler | protected
syncParams_(Param &p, bool to_outer) | MSSim | protected
type_ | ProgressLogger | mutable protected
updateMembers_() override | MSSim | protected virtual
warn_empty_defaults_ | DefaultParamHandler | protected
~DefaultParamHandler() | DefaultParamHandler | virtual
~MSSim() override | MSSim |
~ProgressLogger() | ProgressLogger |