| OpenMS 2.5.0

ItraqFourPlexQuantitationMethod.h
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31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Stephan Aiche $
33 // --------------------------------------------------------------------------
34
35 #pragma once
36
37 #include <OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h>
38
39 namespace OpenMS
40 {
46 class OPENMS_DLLAPI ItraqFourPlexQuantitationMethod :
47 public IsobaricQuantitationMethod
48 {
49 public:
51 ItraqFourPlexQuantitationMethod();
52
54 ~ItraqFourPlexQuantitationMethod() override;
55
57 ItraqFourPlexQuantitationMethod(const ItraqFourPlexQuantitationMethod& other);
58
60 ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs);
61
64
65 const String& getMethodName() const override;
66
67 const IsobaricChannelList& getChannelInformation() const override;
68
69 Size getNumberOfChannels() const override;
70
71 Matrix<double> getIsotopeCorrectionMatrix() const override;
72
73 Size getReferenceChannel() const override;
74
76
77 private:
79 IsobaricChannelList channels_;
80
82 static const String name_;
83
85 Size reference_channel_;
86
87 protected:
89 void setDefaultParams_();
90
92 void updateMembers_() override;
93 };
94 } // namespace
95
OpenMS::String
A more convenient string class.
Definition: String.h:58
OpenMS::IsobaricQuantitationMethod
Abstract base class describing an isobaric quantitation method in terms of the used channels and an i...
Definition: IsobaricQuantitationMethod.h:54
OpenMS::ItraqFourPlexQuantitationMethod
iTRAQ 4 plex quantitation to be used with the IsobaricQuantitation.
Definition: ItraqFourPlexQuantitationMethod.h:46
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
OpenMS::ItraqFourPlexQuantitationMethod::channels_
IsobaricChannelList channels_
the actual information on the different itraq4plex channels.
Definition: ItraqFourPlexQuantitationMethod.h:79
OpenMS::ItraqFourPlexQuantitationMethod::name_
static const String name_
The name of the quantitation method.
Definition: ItraqFourPlexQuantitationMethod.h:82
OpenMS::Matrix< double >
IsobaricQuantitationMethod.h
OpenMS::Size
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition: Types.h:127
OpenMS::ItraqFourPlexQuantitationMethod::reference_channel_
Size reference_channel_
The reference channel for this experiment.
Definition: ItraqFourPlexQuantitationMethod.h:85