| OpenMS 2.5.0

FeatureFinderMultiplex.cpp File Reference
`#include <OpenMS/config.h>`
`#include <OpenMS/APPLICATIONS/TOPPBase.h>`
`#include <OpenMS/CONCEPT/ProgressLogger.h>`
`#include <OpenMS/DATASTRUCTURES/DBoundingBox.h>`
`#include <OpenMS/DATASTRUCTURES/ListUtils.h>`
`#include <OpenMS/KERNEL/MSExperiment.h>`
`#include <OpenMS/KERNEL/StandardTypes.h>`
`#include <OpenMS/KERNEL/ConsensusMap.h>`
`#include <OpenMS/KERNEL/FeatureMap.h>`
`#include <OpenMS/FORMAT/MzMLFile.h>`
`#include <OpenMS/FORMAT/FeatureXMLFile.h>`
`#include <OpenMS/MATH/STATISTICS/LinearRegression.h>`
`#include <OpenMS/KERNEL/RangeUtils.h>`
`#include <OpenMS/KERNEL/ChromatogramTools.h>`
`#include <OpenMS/METADATA/MSQuantifications.h>`
`#include <OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h>`
`#include <OpenMS/FORMAT/ConsensusXMLFile.h>`
`#include <OpenMS/FORMAT/MzQuantMLFile.h>`
`#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h>`
`#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h>`
`#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h>`
`#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h>`
`#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h>`
`#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h>`
`#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h>`
`#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h>`
`#include <OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h>`
`#include <OpenMS/DATASTRUCTURES/DPosition.h>`
`#include <boost/algorithm/string/split.hpp>`
`#include <boost/algorithm/string/replace.hpp>`
`#include <boost/algorithm/string/classification.hpp>`
`#include <QDir>`
`#include <cmath>`
`#include <vector>`
`#include <algorithm>`
`#include <fstream>`
`#include <limits>`
`#include <locale>`
`#include <iomanip>`