| OpenMS 2.5.0

Here is a list of all class members with links to the classes they belong to:

### - h -

- H : ExtendedIsotopeModel , IsotopeModel
- halflogtwopi : GaussFitter::GaussFitResult
- handleBinaryDataArray_() : MzMLSpectrumDecoder
- handleBinaryDataArrayCVParam() : MzMLHandlerHelper
- handleCVParam_() : MzIdentMLHandler , MzMLHandler , MzQuantMLHandler , TraMLHandler
- HandleIterator : MapAlignmentEvaluationAlgorithm
- handlePTMs() : InspectInfile , SequestInfile
- handlePTMs_() : PepNovoInfile
- handleQueryMatch_() : FalseDiscoveryRate
- handler_ : MSDataSqlConsumer , SpectrumAccessSqMass
- handles_ : ConsensusFeature
- HandleSetType : ConsensusFeature
- handleTerm_() : MzDataValidator , MzMLValidator , SemanticValidator
- handleUserParam_() : MzIdentMLHandler , MzMLHandler , MzQuantMLHandler , TraMLHandler
- HARDKLOER : FileTypes
- has() : AASequence , Map< Key, T > , ModificationsDB , String , StringUtils
- has_fraction_ : MSstatsFile::MSstatsLine_
- has_H2O_loss : SimpleTSGXLMS::LossIndex , TheoreticalSpectrumGeneratorXLMS::LossIndex
- has_intensity_range_ : FeatureFileOptions , PeakFileOptions
- has_mz_range_ : FeatureFileOptions , PeakFileOptions
- has_NH3_loss : SimpleTSGXLMS::LossIndex , TheoreticalSpectrumGeneratorXLMS::LossIndex
- has_rt_range_ : FeatureFileOptions , PeakFileOptions
- has_uncommited_data_ : ParamEditorDelegate
- has_unit_accession : SemanticValidator::CVTerm
- has_unit_name : SemanticValidator::CVTerm
- has_value : SemanticValidator::CVTerm
- HasActivationMethod() : HasActivationMethod< SpectrumType >
- hasBetterScore() : SimpleSearchEngineAlgorithm::AnnotatedHit_
- hasCharge() : PeptideCompound , TraMLProduct
- hasChromatogram() : MRMTransitionGroup< ChromatogramType, TransitionType >
- hasCNterminalMods_() : MRMDecoy
- hasCompound() : TargetedExperiment
- hasCTerminalModification() : AASequence
- hasCVReference() : CVMappings
- hasCVTerm() : CVTermList , CVTermListInterface
- HasDecoyAnnotation() : IDFilter::HasDecoyAnnotation< HitType >
- hasElement() : ElementDB , EmpiricalFormula
- hasEnzyme() : DigestionEnzymeDB< DigestionEnzymeType, InstanceType >
- hasError() : MascotRemoteQuery , NetworkGetRequest
- hasFactor() : ExperimentalDesign::SampleSection
- hasFilters() : PeakFileOptions
- hasFivePrimeMod() : NASequence
- hasFollowUpScan : IsobaricChannelExtractor::PuritySate_
- HasGoodScore() : IDFilter::HasGoodScore< HitType >
- hash_type : ConsensusMapMergerAlgorithm , IDMergerAlgorithm
- HashGrid : HashGrid< Cluster >::ConstIterator , HashGrid< Cluster > , HashGrid< Cluster >::Iterator
- hasInferenceData() : ProteinIdentification
- hasInferenceEngineAsSearchEngine() : ProteinIdentification
- hasIntensityRange() : FeatureFileOptions , PeakFileOptions
- HasInvalidLength() : NucleicAcidSearchEngine::HasInvalidLength
- hasInvalidUniqueId() : UniqueIdInterface
- hasInverseOrientation() : AxisWidget
- hasLowIntensityReporter_() : IsobaricChannelExtractor
- HasMatchingAccession() : IDFilter::HasMatchingAccession< HitType >
- HasMatchingAccessionUnordered() : IDFilter::HasMatchingAccessionUnordered< HitType >
- HasMaxMetaValue() : IDFilter::HasMaxMetaValue< HitType >
- HasMaxRank() : IDFilter::HasMaxRank< HitType >
- HasMetaValue() : HasMetaValue< MetaContainer > , IDFilter::HasMetaValue< HitType >
- hasMS1Zeros() : TOPPViewBase
- hasMSLevels() : PeakFileOptions
- hasMZ() : PeptideIdentification
- hasMZRange() : FeatureFileOptions , PeakFileOptions
- hasName() : IMSAlphabet
- hasNeutralLoss() : Residue , ResidueModification
- hasNTerminalModification() : AASequence
- hasNTermNeutralLosses() : Residue
- hasPeptide() : TargetedExperiment
- hasPeptideIdentifications() : TOPPViewBase
- HasPrecursorCharge() : HasPrecursorCharge< SpectrumType >
- hasPrecursorChromatogram() : MRMTransitionGroup< ChromatogramType, TransitionType >
- hasPrecursorCVTerms() : ReactionMonitoringTransition
- hasPrediction() : ReactionMonitoringTransition
- hasPrefix() : AASequence , String , StringUtils
- hasProtein() : TargetedExperiment
- hasRegEx() : DigestionEnzymeDB< DigestionEnzymeType, InstanceType >
- hasResidue() : ResidueDB
- hasRetentionTime() : PeptideCompound
- hasRT() : PeptideIdentification
- hasRTRange() : FeatureFileOptions , PeakFileOptions
- hasSample() : ExperimentalDesign::SampleSection
- HasScanMode() : HasScanMode< SpectrumType >
- HasScanPolarity() : HasScanPolarity< SpectrumType >
- hasStream() : StreamHandler
- hasStream_() : LogStream
- hasSubsequence() : AASequence
- hasSubstring() : String , StringUtils
- hasSuffix() : AASequence , String , StringUtils
- hasTag() : Param
- hasTermWithName() : ControlledVocabulary
- hasThreePrimeMod() : NASequence
- hasTransition() : MRMTransitionGroup< ChromatogramType, TransitionType >
- hasUncommittedData() : ParamEditorDelegate
- hasUnit() : CVTerm , DataValue
- hasValidExtension() : FileHandler
- hasValidLimits() : PeptideEvidence
- hasValidPositions() : MoleculeParentMatch
- hasValidUniqueId() : UniqueIdInterface
- hasValue() : CVTerm
- haveInstance_ : SuperHirnParameters
- HCID : Precursor
- HDF5Connector() : HDF5Connector
- head_ : CompressedInputSource
- header_ : QcMLFile
- header_names_ : TransitionTSVFile
- headerContextMenu_() : SpectraIdentificationViewWidget
- headerMatches() : FASTAFile::FASTAEntry
- HEAVY : Tagging
- heavy_channel_arginine_label_ : SILACLabeler
- HEAVY_CHANNEL_ID_ : O18Labeler
- heavy_channel_label_ : ICPLLabeler
- heavy_channel_lysine_label_ : SILACLabeler
- HEAVY_FEATURE_MAPID_ : ICPLLabeler , SILACLabeler
- height() : DIntervalBase< D > , PenaltyFactorsIntensity , PeakIntegrator::PeakArea , PeakIntegrator::PeakBackground , PeakShape
- height_ : EGHFitter1D , EGHModel , EGHTraceFitter , EmgFitter1D , EmgModel , GaussTraceFitter , Spectrum3DOpenGLCanvas
- heightColor_() : Spectrum2DCanvas
- helicity_ : SvmTheoreticalSpectrumGenerator
- hidden_ : HMMState
- hidden_entries_ : TOPPASToolConfigDialog
- HiddenMarkovModel() : HiddenMarkovModel
- hide_no_identification_ : SpectraIdentificationViewWidget
- hide_type_ : SvmTheoreticalSpectrumGenerator
- hideAxes() : Spectrum1DWidget , SpectrumWidget
- high_mz_ : AreaIterator< ValueT, ReferenceT, PointerT, SpectrumIteratorT, PeakIteratorT >
- higher_better : ScoreType
- higher_better_ : PeptideIdentificationVisualizer , ProteinIdentificationVisualizer
- higher_is_better : PeptideHit::PepXMLAnalysisResult
- higher_score_better : IDFilter::HasGoodScore< HitType >
- higher_score_better_ : PeptideIdentification , ProteinIdentification
- highlightPeak_() : Spectrum2DCanvas
- Histogram() : Histogram< ValueType, BinSizeType >
- histogram_oob_percent_ : SignalToNoiseEstimatorMedian< Container >
- HistogramDialog() : HistogramDialog
- HistogramWidget() : HistogramWidget
- hit_pev_ : MzIdentMLDOMHandler
- hits : CsiFingerIdMzTabWriter::CsiAdapterIdentification , SiriusMzTabWriter::SiriusAdapterIdentification
- hits_ : MascotInfile , PeptideIdentification , SpectrumIdentification
- hits_endPositions : PatternAuxData< TNeedle >
- HitsByScore : NucleicAcidSearchEngine
- HitType : PeptideIdentification , ProteinIdentification
- hmdb_properties_mapping_ : AccurateMassSearchEngine
- HMDBPropsMapping : AccurateMassSearchEngine
- HMMState() : HMMState
- HN : IonSource
- horizontalProjection() : Spectrum2DWidget
- horizontalScrollBarChange() : Spectrum1DCanvas , Spectrum2DCanvas , SpectrumCanvas
- host_name_ : MascotRemoteQuery
- hover_edge_ : TOPPASScene
- hover_pos_ : TOPPASEdge
- hoveringEdgePosChanged() : TOPPASVertex
- HPLC() : HPLC
- hplc_ : ExperimentalSettings
- hplccolumn_ : HPLCVisualizer
- hplccomment_ : HPLCVisualizer
- hplcflux_ : HPLCVisualizer
- hplcinstrument_ : HPLCVisualizer
- hplcpressure_ : HPLCVisualizer
- hplctemperature_ : HPLCVisualizer
- HPLCVisualizer() : HPLCVisualizer
- hr_data_ : FeatureFinderAlgorithmIsotopeWavelet , IsotopeWaveletTransform< PeakType >
- HTML : FileTypes
- html_code_ : Ribonucleotide
- hull_points : PeakIntegrator::PeakArea
- hull_position_ : FeatureXMLFile
- HullPointType : ConvexHull2D
- hydrogen_ : PepXMLFile
- hydrogen_mass_ : PepXMLFile
- hydrophobicity_ : SvmTheoreticalSpectrumGenerator
- HYPOTHETICAL : ResidueModification