| OpenMS 2.5.0

AbsoluteQuantitationStandardsFile.h
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2 // OpenMS -- Open-Source Mass Spectrometry
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31 // $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $
32 // $Authors: Douglas McCloskey, Pasquale Domenico Colaianni $
33 // --------------------------------------------------------------------------
34
35 #pragma once
36
37 #include <OpenMS/config.h> // OPENMS_DLLAPI
38 #include <OpenMS/FORMAT/CsvFile.h>
39 #include <OpenMS/METADATA/AbsoluteQuantitationStandards.h>
40
41 namespace OpenMS
42 {
46 class OPENMS_DLLAPI AbsoluteQuantitationStandardsFile
47 {
48 public:
49 AbsoluteQuantitationStandardsFile() = default;
50 virtual ~AbsoluteQuantitationStandardsFile() = default;
51
64 void load(
65 const String& filename,
66 std::vector<AbsoluteQuantitationStandards::runConcentration>& run_concentrations
67 ) const;
68
69 protected:
83 AbsoluteQuantitationStandards::runConcentration extractRunFromLine_(
84 const StringList& line,
85 const std::map<String, Size>& headers
86 ) const;
87 };
88 }
89
OpenMS::String
A more convenient string class.
Definition: String.h:58
OpenMS::AbsoluteQuantitationStandards::runConcentration
Structure to map runs to components to known concentrations.
Definition: AbsoluteQuantitationStandards.h:62
CsvFile.h
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
OpenMS::AbsoluteQuantitationStandardsFile
Load files containing runConcentration data.
Definition: AbsoluteQuantitationStandardsFile.h:46
OpenMS::StringList
std::vector< String > StringList
Vector of String.
Definition: ListUtils.h:70
AbsoluteQuantitationStandards.h